Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P12010_001 | Banana | cytosol | 68.1 | 68.84 |
| AT4G12690.2 | Thale cress | nucleus | 55.2 | 54.04 |
| Zm00001d015796_P001 | Maize | cytosol | 36.92 | 53.65 |
| CDY27882 | Canola | nucleus | 54.84 | 52.58 |
| CDY00849 | Canola | nucleus | 54.84 | 52.58 |
| PGSC0003DMT400069001 | Potato | plastid | 56.63 | 51.3 |
| Solyc12g044670.1.1 | Tomato | plastid | 56.63 | 51.3 |
| AT2G04220.1 | Thale cress | cytosol | 56.27 | 51.14 |
| Bra015139.1-P | Field mustard | nucleus | 55.2 | 50.99 |
| VIT_12s0057g01390.t01 | Wine grape | mitochondrion | 55.56 | 49.68 |
| Zm00001d053654_P001 | Maize | plastid | 52.69 | 49.66 |
| KRH16994 | Soybean | cytosol | 53.76 | 49.18 |
| KRH72631 | Soybean | cytosol | 53.76 | 48.86 |
| PGSC0003DMT400006698 | Potato | mitochondrion | 53.76 | 48.7 |
| Solyc03g121220.2.1 | Tomato | cytosol, mitochondrion, nucleus, plastid | 53.76 | 47.17 |
| CDX86317 | Canola | plastid | 51.61 | 46.91 |
| CDY00069 | Canola | plastid | 51.61 | 46.75 |
| OQU84582 | Sorghum | cytosol | 53.41 | 46.42 |
| CDY19961 | Canola | plastid | 50.9 | 46.41 |
| KRG90008 | Soybean | plastid | 52.33 | 46.35 |
| CDX85324 | Canola | plastid | 45.88 | 46.04 |
| CDY05690 | Canola | mitochondrion, plastid | 49.1 | 45.67 |
| CDY48744 | Canola | mitochondrion, plastid | 49.46 | 45.39 |
| Bra036180.1-P | Field mustard | plastid | 51.61 | 44.72 |
| Bra037498.1-P | Field mustard | plastid | 51.61 | 44.58 |
| GSMUA_AchrUn_... | Banana | plastid | 43.37 | 43.06 |
| AT5G48270.1 | Thale cress | plastid | 49.46 | 42.86 |
| Bra020708.1-P | Field mustard | mitochondrion | 49.46 | 42.86 |
| TraesCS6D01G150500.1 | Wheat | nucleus | 47.31 | 42.17 |
| TraesCS6A01G161700.1 | Wheat | cytosol | 46.95 | 41.85 |
| TraesCS6B01G189500.1 | Wheat | cytosol | 46.59 | 41.67 |
| HORVU6Hr1G032720.1 | Barley | cytosol | 46.59 | 41.27 |
| GSMUA_Achr10P... | Banana | cytosol | 46.59 | 40.88 |
| PGSC0003DMT400076600 | Potato | cytosol | 42.65 | 39.93 |
| Solyc12g015900.1.1 | Tomato | cytosol | 42.29 | 39.6 |
| Os02t0198800-01 | Rice | cytosol, nucleus | 51.25 | 38.44 |
| AT3G13229.1 | Thale cress | cytosol | 39.78 | 38.41 |
| GSMUA_Achr5P24690_001 | Banana | cytosol | 39.78 | 38.28 |
| KRH14191 | Soybean | cytosol | 42.65 | 38.26 |
| GSMUA_Achr7P01840_001 | Banana | cytosol, peroxisome, plastid | 35.84 | 37.88 |
| CDY66553 | Canola | cytosol | 37.28 | 36.88 |
| Bra001495.1-P | Field mustard | cytosol | 37.63 | 36.08 |
| CDX82547 | Canola | cytosol | 37.63 | 36.08 |
| GSMUA_Achr7P07540_001 | Banana | endoplasmic reticulum, nucleus, peroxisome, plastid | 32.26 | 34.48 |
| GSMUA_Achr11P... | Banana | plastid | 29.39 | 28.28 |
| GSMUA_Achr8P07610_001 | Banana | cytosol | 29.03 | 28.12 |
| GSMUA_Achr8P29560_001 | Banana | nucleus | 27.6 | 26.1 |
| GSMUA_Achr10P... | Banana | nucleus, plastid | 27.96 | 25.57 |
| GSMUA_Achr3P03050_001 | Banana | nucleus | 26.88 | 25.51 |
| GSMUA_Achr2P20270_001 | Banana | cytosol | 26.16 | 23.86 |
| GSMUA_Achr9P13220_001 | Banana | mitochondrion, peroxisome, plastid | 25.09 | 18.42 |
| GSMUA_Achr10P... | Banana | cytosol, golgi, plastid | 25.81 | 17.69 |
| GSMUA_Achr5P22830_001 | Banana | cytosol, nucleus, peroxisome | 24.01 | 17.22 |
| GSMUA_Achr3P04550_001 | Banana | plastid | 14.34 | 15.04 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP18910_001 | EnsemblPlants:GSMUA_AchrUn_randomT18910_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG18910_001 | InterPro:DUF868_pln | PANTHER:PTHR31972 | PANTHER:PTHR31972:SF2 |
| PFAM:PF05910 | UniParc:UPI000296BB52 | UniProt:M0UAF0 | MapMan:35.2 | : | : |
Description
expressed protein [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG18910_001]
Coordinates
chrchrUn_random:+:91076854..91077759
Molecular Weight (calculated)
31456.6 Da
IEP (calculated)
8.476
GRAVY (calculated)
-0.394
Length
279 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEAVTSSHR DPADKHAEEA AGGKTPPQCS VISTYRAKIG GVPRIVTVVW SKNLMNHSLS VSIEKGSSLT CKVDLKPWPF RSKKGSKSFD VDGKQIDVSW
101: NFRLAKFSDG PEPTEGYYVA LVCDEEVVLL LGDRKKKAYK KTRSRPSLEE ATLVSKKENV FGKKCFAARV RFDGRNKEHD IVVANSIAEH KDPEMWISID
201: GVILIHVNHL QWKFRGNETV WVEQVPVQVL WDVHDWLFRG PGSGHALFMF KPGLPALAAE EKHDGGDPFC FFLYAWKME
101: NFRLAKFSDG PEPTEGYYVA LVCDEEVVLL LGDRKKKAYK KTRSRPSLEE ATLVSKKENV FGKKCFAARV RFDGRNKEHD IVVANSIAEH KDPEMWISID
201: GVILIHVNHL QWKFRGNETV WVEQVPVQVL WDVHDWLFRG PGSGHALFMF KPGLPALAAE EKHDGGDPFC FFLYAWKME
001: MSLRSESSTA EKITEDPVTY KTAQSSVTCI YQAHMVGFWR NVRVLWSKNL MNHSLTVMVT SVQGDMNYCC KVDLKPWHFW YKKGYKSFEV EGNQVDVYWD
101: FRSAKFNGGP EPSSDFYVAL VSEEEVVLLL GDHKKKAFKR TKSRPSLVDA ALFYKKENVF GKKIFSTRAK FHDRKREHEI VVESSTGAKE PEMWISVDGI
201: VLVQVRNLQW KFRGNQTVLV DKEPVQVFWD VYDWLFSTPG TGHGLFIFKP ESGESETSNE TKNCSASSSS SSSEFCLFLY AWKLE
101: FRSAKFNGGP EPSSDFYVAL VSEEEVVLLL GDHKKKAFKR TKSRPSLVDA ALFYKKENVF GKKIFSTRAK FHDRKREHEI VVESSTGAKE PEMWISVDGI
201: VLVQVRNLQW KFRGNQTVLV DKEPVQVFWD VYDWLFSTPG TGHGLFIFKP ESGESETSNE TKNCSASSSS SSSEFCLFLY AWKLE
Arabidopsis Description
At4g12690 [Source:UniProtKB/TrEMBL;Acc:Q9SU17]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.