Factsheet for AT5G48270.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX86317	Canola	plastid	86.65	90.88
Bra037498.1-P	Field mustard	plastid	90.68	90.4
CDY05690	Canola	mitochondrion, plastid	83.23	89.33
CDX85324	Canola	plastid	77.02	89.21
Bra020708.1-P	Field mustard	mitochondrion	88.2	88.2
CDY48744	Canola	mitochondrion, plastid	82.92	87.83
Bra036180.1-P	Field mustard	plastid	87.27	87.27
CDY19961	Canola	plastid	82.92	87.25
CDY00069	Canola	plastid	82.61	86.36
AT4G12690.2	Thale cress	nucleus	55.9	63.16
AT2G04220.1	Thale cress	cytosol	59.01	61.89
KRH16994	Soybean	cytosol	55.59	58.69
KRH72631	Soybean	cytosol	55.28	57.98
VIT_12s0057g01390.t01	Wine grape	mitochondrion	54.66	56.41
PGSC0003DMT400069001	Potato	plastid	53.73	56.17
Solyc12g044670.1.1	Tomato	plastid	53.73	56.17
KRG90008	Soybean	plastid	52.48	53.65
PGSC0003DMT400006698	Potato	mitochondrion	50.62	52.92
Solyc03g121220.2.1	Tomato	cytosol, mitochondrion, nucleus, plastid	50.62	51.26
GSMUA_AchrUn_...	Banana	cytosol	42.86	49.46
Zm00001d015796_P001	Maize	cytosol	28.26	47.4
GSMUA_Achr3P12010_001	Banana	cytosol	39.75	46.38
Zm00001d053654_P001	Maize	plastid	40.99	44.59
OQU84582	Sorghum	cytosol	42.24	42.37
TraesCS6B01G189500.1	Wheat	cytosol	40.06	41.35
TraesCS6D01G150500.1	Wheat	nucleus	39.75	40.89
TraesCS6A01G161700.1	Wheat	cytosol	39.44	40.58
HORVU6Hr1G032720.1	Barley	cytosol	39.44	40.32
AT3G13229.1	Thale cress	cytosol	33.23	37.02
AT5G28150.1	Thale cress	cytosol, plastid	32.3	35.99
AT3G04860.1	Thale cress	plastid	31.99	35.64
Os02t0198800-01	Rice	cytosol, nucleus	38.82	33.6
AT2G27770.1	Thale cress	plastid	25.16	25.31
AT5G11000.1	Thale cress	cytosol, plastid	27.95	23.14
AT2G25200.1	Thale cress	plastid	24.22	22.03
AT2G36470.1	Thale cress	nucleus	20.5	20.18

Protein Annotations

MapMan:35.2	EntrezGene:834880	UniProt:A0A178UKM6	ProteinID:ABE65575.1	ProteinID:AED95644.1	ArrayExpress:AT5G48270
EnsemblPlantsGene:AT5G48270	RefSeq:AT5G48270	TAIR:AT5G48270	RefSeq:AT5G48270-TAIR-G	EnsemblPlants:AT5G48270.1	TAIR:AT5G48270.1
Unigene:At.64275	ProteinID:BAA97007.1	EMBL:DQ132748	InterPro:DUF868_pln	GO:GO:0008150	RefSeq:NP_199638.1
ProteinID:OAO93654.1	PFAM:PF05910	PO:PO:0001016	PO:PO:0001017	PO:PO:0007611	PO:PO:0007616
PO:PO:0009032	PO:PO:0009046	PO:PO:0025022	PO:PO:0025195	PO:PO:0025281	PANTHER:PTHR31972
PANTHER:PTHR31972:SF2	UniProt:Q9LUA7	UniParc:UPI00000A19BF	SEG:seg	:	:

Description

DUF868 family protein (DUF868) [Source:UniProtKB/TrEMBL;Acc:Q9LUA7]

Coordinates

chr5:-:19564422..19565968

Molecular Weight (calculated)

35867.6 Da

IEP (calculated)

6.789

GRAVY (calculated)

-0.181

Length

322 amino acids

Sequence
(BLAST)

001: MLSFRMPSIG SQPTAFAAKI TDNPKTVAQL KSAASPSPHS TVTCGYQAHV AGFFRNVTVL WSKNLMNHSL TVMVSSLDND MNYCCKIDLV KPWQFWSKRG
101: SKSFDVEGNF VEVFWDLRSA KLAGNGSPEP VSDYYVAVVS DEEVVLLLGD LKQKAYKRTK SRPALVEGFI YFKKESIFGK KTFSTRARFD EQRKEHEVVV
201: ESSNGAAEPE MWISVDGIVV VNVKNLQWKF RGNQMVMVDR TPVMVYYDVH DWLFASSETA ASSGLFLFKP VPVGAMVDES FSDAEEGDSG GGSSPLSRYN
301: SASSGFGPLH DFCLFLYAWK LE

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.