Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 1
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX77134 | Canola | cytosol, plastid | 82.81 | 82.04 |
| Bra034367.1-P | Field mustard | plastid | 82.19 | 80.92 |
| CDY30531 | Canola | plastid | 81.56 | 79.57 |
| VIT_06s0061g01360.t01 | Wine grape | plastid | 59.69 | 63.88 |
| KRH26585 | Soybean | plastid | 57.19 | 60.8 |
| KRH22720 | Soybean | plastid | 56.88 | 60.26 |
| KRH25175 | Soybean | cytosol | 55.62 | 56.15 |
| Solyc06g074500.1.1 | Tomato | cytosol | 52.81 | 55.78 |
| PGSC0003DMT400018411 | Potato | cytosol | 52.5 | 55.45 |
| KRH30504 | Soybean | plastid | 55.31 | 54.46 |
| Solyc11g066930.1.1 | Tomato | nucleus, plastid | 49.69 | 49.84 |
| GSMUA_Achr3P03050_001 | Banana | nucleus | 38.75 | 42.18 |
| GSMUA_Achr2P20270_001 | Banana | cytosol | 40.0 | 41.83 |
| GSMUA_Achr8P29560_001 | Banana | nucleus | 38.12 | 41.36 |
| GSMUA_Achr10P... | Banana | nucleus, plastid | 39.06 | 40.98 |
| GSMUA_Achr8P07610_001 | Banana | cytosol | 36.56 | 40.62 |
| GSMUA_Achr11P... | Banana | plastid | 35.31 | 38.97 |
| AT2G36470.1 | Thale cress | nucleus | 39.38 | 38.53 |
| AT3G04860.1 | Thale cress | plastid | 32.81 | 36.33 |
| AT5G28150.1 | Thale cress | cytosol, plastid | 32.19 | 35.64 |
| TraesCS7A01G277900.1 | Wheat | plastid | 30.0 | 32.32 |
| TraesCS7D01G277700.1 | Wheat | plastid | 30.31 | 32.12 |
| HORVU7Hr1G058790.3 | Barley | plastid | 30.31 | 32.01 |
| TraesCS7B01G175700.1 | Wheat | plastid | 30.0 | 31.79 |
| TraesCS4B01G134800.1 | Wheat | plastid | 30.62 | 31.01 |
| TraesCS4A01G183900.1 | Wheat | plastid | 30.31 | 30.79 |
| Zm00001d052520_P001 | Maize | plastid | 30.62 | 30.72 |
| TraesCS5B01G130100.1 | Wheat | plastid | 30.31 | 30.6 |
| TraesCS4D01G129600.1 | Wheat | plastid | 30.31 | 30.5 |
| TraesCS5A01G130200.1 | Wheat | plastid | 30.0 | 30.48 |
| OQU82880 | Sorghum | plastid | 31.25 | 30.4 |
| KXG22966 | Sorghum | plastid | 30.94 | 30.28 |
| HORVU5Hr1G041450.1 | Barley | plastid | 30.31 | 30.12 |
| Zm00001d004919_P001 | Maize | plastid | 30.31 | 30.03 |
| TraesCS5D01G137700.1 | Wheat | plastid | 30.0 | 29.91 |
| Os12t0149000-01 | Rice | plastid | 30.62 | 29.88 |
| Zm00001d003829_P001 | Maize | cytosol, nucleus, peroxisome | 31.56 | 29.36 |
| TraesCS2B01G308700.1 | Wheat | cytosol | 30.31 | 28.96 |
| TraesCS2D01G290200.1 | Wheat | cytosol | 30.0 | 28.92 |
| Zm00001d025337_P001 | Maize | cytosol | 30.62 | 28.41 |
| Os04t0407500-00 | Rice | cytosol, plastid | 22.19 | 28.4 |
| Zm00001d031962_P001 | Maize | plastid | 27.81 | 28.16 |
| TraesCS2A01G292300.1 | Wheat | cytosol | 29.38 | 27.73 |
| AT4G12690.2 | Thale cress | nucleus | 24.69 | 27.72 |
| HORVU4Hr1G001870.2 | Barley | cytosol | 29.38 | 27.33 |
| KXG26216 | Sorghum | cytosol | 31.25 | 26.81 |
| TraesCS4A01G302100.1 | Wheat | cytosol | 29.06 | 26.27 |
| TraesCS4D01G010300.1 | Wheat | cytosol | 28.75 | 26.21 |
| TraesCS4B01G012200.1 | Wheat | cytosol | 28.75 | 26.06 |
| AT5G48270.1 | Thale cress | plastid | 25.31 | 25.16 |
| AT2G04220.1 | Thale cress | cytosol | 24.06 | 25.08 |
| AT3G13229.1 | Thale cress | cytosol | 21.88 | 24.22 |
| AT5G11000.1 | Thale cress | cytosol, plastid | 27.81 | 22.88 |
| AT2G25200.1 | Thale cress | plastid | 25.0 | 22.6 |
Protein Annotations
| MapMan:35.2 | EntrezGene:817323 | UniProt:A0A178VNL6 | ProteinID:AAC73023.1 | ProteinID:AEC08040.1 | EMBL:AK117201 |
| ArrayExpress:AT2G27770 | EnsemblPlantsGene:AT2G27770 | RefSeq:AT2G27770 | TAIR:AT2G27770 | RefSeq:AT2G27770-TAIR-G | EnsemblPlants:AT2G27770.1 |
| TAIR:AT2G27770.1 | EMBL:BT005309 | InterPro:DUF868_pln | RefSeq:NP_180345.1 | ProteinID:OAP07977.1 | PFAM:PF05910 |
| PO:PO:0000293 | PFscan:PS51257 | PANTHER:PTHR31972 | PANTHER:PTHR31972:SF10 | UniProt:Q9ZUX8 | UniParc:UPI000000C5E0 |
| SEG:seg | : | : | : | : | : |
Description
At2g27770 [Source:UniProtKB/TrEMBL;Acc:Q9ZUX8]
Coordinates
chr2:-:11832543..11834427
Molecular Weight (calculated)
36098.0 Da
IEP (calculated)
8.626
GRAVY (calculated)
-0.268
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: MRDLVSCFSE NSINVTHPLS ISSSSSSCSK YSTNNVCISP SLIPSIQTSI TSIYRITLSK HLIIKVTWCN PHNNNGLSIS VASADQNPST TLKLNTSSRF
101: FRKKKGNKSV DSDLGKIEVF WDLSSAKYDS NLCGPEPING FYVIVLVDGQ MGLLLGDSSE ETLRKKGFSG DIGFDFSLVS RQEHFTGNNT FYSTKVRFVE
201: TGDSHEIVIR CNKETEGLKQ SNHYPVLSVC IDKKTVIKVK RLQWNFRGNQ TIFLDGLLVD LMWDVHDWFF SNQGACGRAV FMFRTRNGLD SSRLWLEEKI
301: VKKDQQDKLD FSLFIYACKT
101: FRKKKGNKSV DSDLGKIEVF WDLSSAKYDS NLCGPEPING FYVIVLVDGQ MGLLLGDSSE ETLRKKGFSG DIGFDFSLVS RQEHFTGNNT FYSTKVRFVE
201: TGDSHEIVIR CNKETEGLKQ SNHYPVLSVC IDKKTVIKVK RLQWNFRGNQ TIFLDGLLVD LMWDVHDWFF SNQGACGRAV FMFRTRNGLD SSRLWLEEKI
301: VKKDQQDKLD FSLFIYACKT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.