Factsheet for Zm00001d004919_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d018440_P002
Zm00001d051951_P002

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G27770.1	Zm00001d018440_P002	AT5G43320.1	21798944
AT2G27770.1	Zm00001d051951_P002	AT5G43320.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU82880	Sorghum	plastid	88.85	87.23
Zm00001d052520_P001	Maize	plastid	86.07	87.15
KXG22966	Sorghum	plastid	82.35	81.35
TraesCS5A01G130200.1	Wheat	plastid	69.04	70.79
TraesCS5B01G130100.1	Wheat	plastid	69.04	70.35
TraesCS5D01G137700.1	Wheat	plastid	68.73	69.16
HORVU5Hr1G041450.1	Barley	plastid	68.42	68.63
TraesCS4B01G134800.1	Wheat	plastid	62.85	64.24
TraesCS4A01G183900.1	Wheat	plastid	62.54	64.13
TraesCS4D01G129600.1	Wheat	plastid	62.23	63.21
Os12t0149000-01	Rice	plastid	64.09	63.11
GSMUA_Achr2P20270_001	Banana	cytosol	37.46	39.54
GSMUA_Achr8P29560_001	Banana	nucleus	35.91	39.32
GSMUA_Achr10P...	Banana	nucleus, plastid	36.84	39.02
GSMUA_Achr3P03050_001	Banana	nucleus	35.29	38.78
GSMUA_Achr8P07610_001	Banana	cytosol	33.75	37.85
GSMUA_Achr11P...	Banana	plastid	33.75	37.59
PGSC0003DMT400006889	Potato	nucleus	16.72	35.29
VIT_06s0061g01360.t01	Wine grape	plastid	32.2	34.78
VIT_08s0007g03840.t01	Wine grape	nucleus	32.2	34.55
Zm00001d025337_P001	Maize	cytosol	36.53	34.2
Zm00001d003829_P001	Maize	cytosol, nucleus, peroxisome	36.22	34.01
Zm00001d031962_P001	Maize	plastid	33.13	33.86
KRH26585	Soybean	plastid	31.27	33.55
KRH22720	Soybean	plastid	31.27	33.44
KRH67854	Soybean	cytosol	31.27	32.79
CDX84556	Canola	cytosol	31.58	31.78
CDX79683	Canola	cytosol	30.96	31.55
Bra023071.1-P	Field mustard	cytosol	31.27	31.46
KRH30504	Soybean	plastid	30.96	30.77
Zm00001d015796_P001	Maize	cytosol	18.27	30.73
KRG96144	Soybean	nucleus	29.1	30.62
KRH25175	Soybean	cytosol	30.03	30.6
CDX77134	Canola	cytosol, plastid	30.34	30.34
AT2G27770.1	Thale cress	plastid	30.03	30.31
AT2G36470.1	Thale cress	nucleus	30.65	30.28
Solyc09g009280.1.1	Tomato	cytosol, peroxisome, plastid	27.24	29.93
CDY30531	Canola	plastid	30.03	29.57
Bra034367.1-P	Field mustard	plastid	29.72	29.54
Solyc06g074500.1.1	Tomato	cytosol	27.24	29.04
PGSC0003DMT400018411	Potato	cytosol	27.24	29.04
Solyc11g066930.1.1	Tomato	nucleus, plastid	28.17	28.53
Zm00001d021869_P001	Maize	plastid	25.08	28.52
Zm00001d034527_P001	Maize	plastid	24.77	27.21
Zm00001d013042_P001	Maize	plastid	24.46	27.15
CDY33155	Canola	cytosol	30.03	24.25
Zm00001d053654_P001	Maize	plastid	21.98	23.99
Zm00001d035694_P001	Maize	cytosol	22.29	23.68
Zm00001d045119_P001	Maize	plastid	23.84	21.94
Zm00001d050436_P001	Maize	plastid	26.93	21.32
Zm00001d020470_P001	Maize	plastid	27.55	21.14
Zm00001d032164_P001	Maize	plastid	26.32	21.04
Zm00001d005752_P001	Maize	plastid	27.24	20.9
Zm00001d042425_P001	Maize	plastid	19.5	20.26
Zm00001d037575_P001	Maize	cytosol	8.67	11.62

Protein Annotations

EMBL:BT038956	EMBL:EU958729	EnsemblPlants:Zm00001d004919_P001	EnsemblPlants:Zm00001d004919_T001	EnsemblPlantsGene:Zm00001d004919	EntrezGene:100275926
InterPro:DUF868_pln	PANTHER:PTHR31972	PANTHER:PTHR31972:SF38	PFAM:PF05910	ProteinID:ONM19806.1	SEG:seg
UniParc:UPI00017B7D6D	UniProt:B4FPB8	MapMan:35.2	:	:	:

Description

Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:B4FPB8]

Coordinates

chr2:-:148588681..148589652

Molecular Weight (calculated)

34244.8 Da

IEP (calculated)

9.404

GRAVY (calculated)

0.030

Length

323 amino acids

Sequence
(BLAST)

001: MVSASSLLLP TSVRDLASCV SDGAVRVACT SPASTLTVSS SSSTTSSPPP ATLSVAISYR ATPQAPSSPP LLLRLTWSHS RHGPPTLSFA GPTASSPAVL
101: LRRRRGTYCL PSSTSTSTHI PPLALFWDLT AARYSPASSP SPEPASGFYV VAVASAEVVL AVGDLAAEFI KAKFEGQIPW ARSILPVSRT DRVVAAAPRP
201: GGAVHTARVR FGEGAPEHEV AVGCCRAGAG RPGEEELWVS VDGKRAVHAR RLRWNFRGNQ TVFVDGAPVD VLWDLHGWWF QDPPGCAVVM LRARSALESR
301: LWLEEEARAP GFALLVQALR TPP

Best Arabidopsis Sequence Match ( AT2G27770.1 )
(BLAST)

001: MRDLVSCFSE NSINVTHPLS ISSSSSSCSK YSTNNVCISP SLIPSIQTSI TSIYRITLSK HLIIKVTWCN PHNNNGLSIS VASADQNPST TLKLNTSSRF
101: FRKKKGNKSV DSDLGKIEVF WDLSSAKYDS NLCGPEPING FYVIVLVDGQ MGLLLGDSSE ETLRKKGFSG DIGFDFSLVS RQEHFTGNNT FYSTKVRFVE
201: TGDSHEIVIR CNKETEGLKQ SNHYPVLSVC IDKKTVIKVK RLQWNFRGNQ TIFLDGLLVD LMWDVHDWFF SNQGACGRAV FMFRTRNGLD SSRLWLEEKI
301: VKKDQQDKLD FSLFIYACKT

Arabidopsis Description

At2g27770 [Source:UniProtKB/TrEMBL;Acc:Q9ZUX8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.