Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- nucleus 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os02t0810400-01 | |
| Os02t0810500-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G27770.1 | Os02t0810400-01 | AT5G43320.1 | 21798944 |
| AT2G27770.1 | Os02t0810500-01 | AT5G43320.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G130100.1 | Wheat | plastid | 69.51 | 71.92 |
| TraesCS5A01G130200.1 | Wheat | plastid | 68.29 | 71.11 |
| TraesCS5D01G137700.1 | Wheat | plastid | 67.99 | 69.47 |
| HORVU5Hr1G041450.1 | Barley | plastid | 67.68 | 68.94 |
| Zm00001d052520_P001 | Maize | plastid | 64.94 | 66.77 |
| TraesCS4A01G183900.1 | Wheat | plastid | 64.02 | 66.67 |
| TraesCS4B01G134800.1 | Wheat | plastid | 64.02 | 66.46 |
| KXG22966 | Sorghum | plastid | 65.55 | 65.75 |
| TraesCS4D01G129600.1 | Wheat | plastid | 63.72 | 65.72 |
| OQU82880 | Sorghum | plastid | 65.85 | 65.65 |
| Zm00001d004919_P001 | Maize | plastid | 63.11 | 64.09 |
| GSMUA_Achr8P29560_001 | Banana | nucleus | 36.59 | 40.68 |
| GSMUA_Achr2P20270_001 | Banana | cytosol | 37.5 | 40.2 |
| GSMUA_Achr10P... | Banana | nucleus, plastid | 36.89 | 39.67 |
| GSMUA_Achr3P03050_001 | Banana | nucleus | 34.76 | 38.78 |
| GSMUA_Achr8P07610_001 | Banana | cytosol | 32.93 | 37.5 |
| PGSC0003DMT400006889 | Potato | nucleus | 17.07 | 36.6 |
| Os04t0407500-00 | Rice | cytosol, plastid | 27.74 | 36.4 |
| GSMUA_Achr11P... | Banana | plastid | 32.01 | 36.21 |
| VIT_06s0061g01360.t01 | Wine grape | plastid | 32.93 | 36.12 |
| VIT_08s0007g03840.t01 | Wine grape | nucleus | 30.79 | 33.55 |
| KRH26585 | Soybean | plastid | 30.49 | 33.22 |
| KRH22720 | Soybean | plastid | 30.49 | 33.11 |
| KRH67854 | Soybean | cytosol | 30.18 | 32.14 |
| PGSC0003DMT400018411 | Potato | cytosol | 29.57 | 32.01 |
| Solyc09g009280.1.1 | Tomato | cytosol, peroxisome, plastid | 28.35 | 31.63 |
| CDX77134 | Canola | cytosol, plastid | 31.1 | 31.58 |
| KRG96144 | Soybean | nucleus | 29.27 | 31.27 |
| CDX84556 | Canola | cytosol | 30.49 | 31.15 |
| Solyc06g074500.1.1 | Tomato | cytosol | 28.66 | 31.02 |
| KRH25175 | Soybean | cytosol | 29.88 | 30.91 |
| CDX79683 | Canola | cytosol | 29.88 | 30.91 |
| Bra023071.1-P | Field mustard | cytosol | 30.18 | 30.84 |
| KRH30504 | Soybean | plastid | 30.49 | 30.77 |
| AT2G27770.1 | Thale cress | plastid | 29.88 | 30.62 |
| Bra034367.1-P | Field mustard | plastid | 30.18 | 30.46 |
| CDY30531 | Canola | plastid | 30.18 | 30.18 |
| Os07t0572300-01 | Rice | plastid | 25.61 | 29.58 |
| Solyc11g066930.1.1 | Tomato | nucleus, plastid | 28.66 | 29.47 |
| Os03t0806700-01 | Rice | cytosol, endoplasmic reticulum, peroxisome, plastid | 25.61 | 28.87 |
| AT2G36470.1 | Thale cress | nucleus | 28.05 | 28.13 |
| Os05t0108400-01 | Rice | cytosol | 24.39 | 26.14 |
| CDY33155 | Canola | cytosol | 28.35 | 23.25 |
| Os08t0439600-00 | Rice | plastid | 28.35 | 22.91 |
| Os06t0181800-00 | Rice | plastid | 24.39 | 22.79 |
| Os01t0909400-01 | Rice | cytosol, plastid | 22.56 | 22.77 |
| Os02t0198800-01 | Rice | cytosol, nucleus | 22.87 | 20.16 |
| Os09t0416600-02 | Rice | plastid | 26.83 | 19.82 |
| Os02t0695050-00 | Rice | extracellular, golgi, mitochondrion | 10.98 | 13.85 |
Protein Annotations
| EnsemblPlants:Os12t0149000-01 | EnsemblPlantsGene:Os12g0149000 | EntrezGene:4351505 | InterPro:DUF868_pln | PANTHER:PTHR31972 | PANTHER:PTHR31972:SF38 |
| PFAM:PF05910 | ProteinID:BAT15902.1 | RefSeq:XP_015619077.1 | SEG:seg | UniParc:UPI000224A199 | UniProt:A0A0P0Y6Z9 |
| MapMan:35.2 | : | : | : | : | : |
Description
Protein of unknown function DUF868, plant domain containing protein. (Os12t0149000-01)
Coordinates
chr12:+:2417956..2419337
Molecular Weight (calculated)
34554.7 Da
IEP (calculated)
6.929
GRAVY (calculated)
0.005
Length
328 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSASSLLLP SSVRDFASCI GDGAACTAPS STRTRRGSAA VQAQPSTLSV TASYRVALAS SSSPPLQLRL TWAHSPLGPT LSFSPSASGR KVLVRRRRGS
101: CSVLSSGEDE AVESESELSA SSPRLALFWD LTAARFDPAA SPEPVSGYYV VVAVESAEVV LALGDLAAEF VKAKFEGTTQ IPMAAPFARG ERVVVAVSSD
201: AAAAVTHTAR ARFAEGGAEH EVSVGCAPGG GGGGGGDELW VSIDGKRAVQ ARRLRWNFRG NQTVFVDGQP VDVMWDLHGW WFRREPPAPG WAVVMLRARS
301: ALESRLWLEE EAAAPAFSLL VEAFKSPP
101: CSVLSSGEDE AVESESELSA SSPRLALFWD LTAARFDPAA SPEPVSGYYV VVAVESAEVV LALGDLAAEF VKAKFEGTTQ IPMAAPFARG ERVVVAVSSD
201: AAAAVTHTAR ARFAEGGAEH EVSVGCAPGG GGGGGGDELW VSIDGKRAVQ ARRLRWNFRG NQTVFVDGQP VDVMWDLHGW WFRREPPAPG WAVVMLRARS
301: ALESRLWLEE EAAAPAFSLL VEAFKSPP
001: MRDLVSCFSE NSINVTHPLS ISSSSSSCSK YSTNNVCISP SLIPSIQTSI TSIYRITLSK HLIIKVTWCN PHNNNGLSIS VASADQNPST TLKLNTSSRF
101: FRKKKGNKSV DSDLGKIEVF WDLSSAKYDS NLCGPEPING FYVIVLVDGQ MGLLLGDSSE ETLRKKGFSG DIGFDFSLVS RQEHFTGNNT FYSTKVRFVE
201: TGDSHEIVIR CNKETEGLKQ SNHYPVLSVC IDKKTVIKVK RLQWNFRGNQ TIFLDGLLVD LMWDVHDWFF SNQGACGRAV FMFRTRNGLD SSRLWLEEKI
301: VKKDQQDKLD FSLFIYACKT
101: FRKKKGNKSV DSDLGKIEVF WDLSSAKYDS NLCGPEPING FYVIVLVDGQ MGLLLGDSSE ETLRKKGFSG DIGFDFSLVS RQEHFTGNNT FYSTKVRFVE
201: TGDSHEIVIR CNKETEGLKQ SNHYPVLSVC IDKKTVIKVK RLQWNFRGNQ TIFLDGLLVD LMWDVHDWFF SNQGACGRAV FMFRTRNGLD SSRLWLEEKI
301: VKKDQQDKLD FSLFIYACKT
Arabidopsis Description
At2g27770 [Source:UniProtKB/TrEMBL;Acc:Q9ZUX8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.