Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- plasma membrane 1
- plastid 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400006889 | Potato | nucleus | 51.02 | 98.04 |
| VIT_08s0007g03840.t01 | Wine grape | nucleus | 52.72 | 51.49 |
| KRG96144 | Soybean | nucleus | 51.7 | 49.51 |
| KRH67854 | Soybean | cytosol | 51.02 | 48.7 |
| Solyc06g074500.1.1 | Tomato | cytosol | 48.64 | 47.19 |
| Solyc11g066930.1.1 | Tomato | nucleus, plastid | 44.22 | 40.75 |
| GSMUA_Achr10P... | Banana | nucleus, plastid | 41.5 | 40.0 |
| GSMUA_Achr8P29560_001 | Banana | nucleus | 39.8 | 39.66 |
| GSMUA_Achr3P03050_001 | Banana | nucleus | 39.12 | 39.12 |
| Bra023071.1-P | Field mustard | cytosol | 41.84 | 38.32 |
| CDX84556 | Canola | cytosol | 41.84 | 38.32 |
| CDX79683 | Canola | cytosol | 40.82 | 37.85 |
| AT2G36470.1 | Thale cress | nucleus | 41.16 | 37.0 |
| GSMUA_Achr11P... | Banana | plastid | 36.39 | 36.9 |
| GSMUA_Achr2P20270_001 | Banana | cytosol | 37.07 | 35.62 |
| GSMUA_Achr8P07610_001 | Banana | cytosol | 34.01 | 34.72 |
| Solyc01g097790.2.1 | Tomato | cytosol | 34.69 | 34.11 |
| Solyc09g075960.1.1 | Tomato | nucleus, peroxisome, plasma membrane | 32.99 | 32.01 |
| TraesCS5B01G130100.1 | Wheat | plastid | 33.33 | 30.91 |
| TraesCS5A01G130200.1 | Wheat | plastid | 32.99 | 30.79 |
| TraesCS5D01G137700.1 | Wheat | plastid | 33.33 | 30.53 |
| HORVU5Hr1G041450.1 | Barley | plastid | 33.33 | 30.43 |
| Os12t0149000-01 | Rice | plastid | 31.63 | 28.35 |
| CDY33155 | Canola | cytosol | 38.44 | 28.25 |
| OQU82880 | Sorghum | plastid | 31.29 | 27.96 |
| TraesCS4A01G183900.1 | Wheat | plastid | 29.59 | 27.62 |
| Zm00001d052520_P001 | Maize | plastid | 29.93 | 27.59 |
| KXG22966 | Sorghum | plastid | 30.61 | 27.52 |
| Zm00001d004919_P001 | Maize | plastid | 29.93 | 27.24 |
| TraesCS4B01G134800.1 | Wheat | plastid | 29.25 | 27.22 |
| TraesCS4D01G129600.1 | Wheat | plastid | 29.25 | 27.04 |
| TraesCS7A01G277900.1 | Wheat | plastid | 27.21 | 26.94 |
| TraesCS7B01G175700.1 | Wheat | plastid | 27.55 | 26.82 |
| TraesCS7D01G277700.1 | Wheat | plastid | 27.55 | 26.82 |
| Os04t0407500-00 | Rice | cytosol, plastid | 22.79 | 26.8 |
| HORVU7Hr1G058790.3 | Barley | plastid | 27.55 | 26.73 |
| Zm00001d003829_P001 | Maize | cytosol, nucleus, peroxisome | 30.27 | 25.87 |
| Zm00001d025337_P001 | Maize | cytosol | 30.27 | 25.8 |
| Solyc03g112130.1.1 | Tomato | cytosol | 27.89 | 25.79 |
| TraesCS2D01G290200.1 | Wheat | cytosol | 28.91 | 25.6 |
| TraesCS2B01G308700.1 | Wheat | cytosol | 28.57 | 25.07 |
| Zm00001d031962_P001 | Maize | plastid | 26.53 | 24.68 |
| TraesCS2A01G292300.1 | Wheat | cytosol | 28.23 | 24.48 |
| Solyc03g121220.2.1 | Tomato | cytosol, mitochondrion, nucleus, plastid | 26.19 | 24.21 |
| KXG26216 | Sorghum | cytosol | 30.27 | 23.86 |
| Solyc12g015900.1.1 | Tomato | cytosol | 23.81 | 23.49 |
| HORVU4Hr1G001870.2 | Barley | cytosol | 26.87 | 22.97 |
| Solyc12g044670.1.1 | Tomato | plastid | 23.81 | 22.73 |
| TraesCS4A01G302100.1 | Wheat | cytosol | 27.21 | 22.6 |
| TraesCS4D01G010300.1 | Wheat | cytosol | 26.87 | 22.51 |
| TraesCS4B01G012200.1 | Wheat | cytosol | 26.87 | 22.38 |
| Solyc08g028780.1.1 | Tomato | mitochondrion | 25.51 | 22.12 |
| Solyc01g097830.2.1 | Tomato | cytosol, nucleus, peroxisome | 24.15 | 20.52 |
Protein Annotations
| EnsemblPlants:Solyc09g009280.1.1 | EnsemblPlantsGene:Solyc09g009280.1 | InterPro:DUF868_pln | PANTHER:PTHR31972 | PANTHER:PTHR31972:SF16 | PFAM:PF05910 |
| SEG:seg | UniParc:UPI000276C4D4 | UniProt:K4CQV7 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr9:-:2659312..2660196
Molecular Weight (calculated)
33836.8 Da
IEP (calculated)
8.047
GRAVY (calculated)
-0.243
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: MRNIASCYNE HAIKVTNSHC SNPSNQVVYN IPSLQNVVTC IYKVKISSIE KQQFLIKITW CCLLQHVFSI SISERYIKNF KKVVTILDKS KGSQTIELYS
101: SRFDVYWDLC NAKYEGGPEP IKGFFVKILV NCEVGLVLGD MGHEFELKKL NLDDKFSRFG LVSRNEHFSS SSVLVTKGKF SDNGKCHDIL IKNSSSMLFV
201: SIDKKSVIQV KRLQWNFRGN QTIFLDGLVV DFMWDVHDWL CNPKSGCAMF MFRTRSGLDS RLWLDQEKNL EQQQEEEEEK DGFSLMICAT KSPD
101: SRFDVYWDLC NAKYEGGPEP IKGFFVKILV NCEVGLVLGD MGHEFELKKL NLDDKFSRFG LVSRNEHFSS SSVLVTKGKF SDNGKCHDIL IKNSSSMLFV
201: SIDKKSVIQV KRLQWNFRGN QTIFLDGLVV DFMWDVHDWL CNPKSGCAMF MFRTRSGLDS RLWLDQEKNL EQQQEEEEEK DGFSLMICAT KSPD
001: MRDLVSCFSE NSINVTHPLS ISSSSSSCSK YSTNNVCISP SLIPSIQTSI TSIYRITLSK HLIIKVTWCN PHNNNGLSIS VASADQNPST TLKLNTSSRF
101: FRKKKGNKSV DSDLGKIEVF WDLSSAKYDS NLCGPEPING FYVIVLVDGQ MGLLLGDSSE ETLRKKGFSG DIGFDFSLVS RQEHFTGNNT FYSTKVRFVE
201: TGDSHEIVIR CNKETEGLKQ SNHYPVLSVC IDKKTVIKVK RLQWNFRGNQ TIFLDGLLVD LMWDVHDWFF SNQGACGRAV FMFRTRNGLD SSRLWLEEKI
301: VKKDQQDKLD FSLFIYACKT
101: FRKKKGNKSV DSDLGKIEVF WDLSSAKYDS NLCGPEPING FYVIVLVDGQ MGLLLGDSSE ETLRKKGFSG DIGFDFSLVS RQEHFTGNNT FYSTKVRFVE
201: TGDSHEIVIR CNKETEGLKQ SNHYPVLSVC IDKKTVIKVK RLQWNFRGNQ TIFLDGLLVD LMWDVHDWFF SNQGACGRAV FMFRTRNGLD SSRLWLEEKI
301: VKKDQQDKLD FSLFIYACKT
Arabidopsis Description
At2g27770 [Source:UniProtKB/TrEMBL;Acc:Q9ZUX8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.