Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- plastid 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400089872 | Potato | cytosol, peroxisome, plastid | 97.69 | 97.41 |
| VIT_14s0030g01700.t01 | Wine grape | plastid | 62.72 | 66.56 |
| KRG96948 | Soybean | plastid | 54.62 | 60.58 |
| KRH68709 | Soybean | plastid | 52.6 | 59.67 |
| KRH34068 | Soybean | plastid | 55.2 | 57.7 |
| KRG92733 | Soybean | plastid | 54.91 | 57.4 |
| Solyc09g075960.1.1 | Tomato | nucleus, peroxisome, plasma membrane | 27.17 | 31.02 |
| Solyc01g097790.2.1 | Tomato | cytosol | 26.01 | 30.1 |
| Solyc08g028780.1.1 | Tomato | mitochondrion | 28.9 | 29.5 |
| Solyc03g112130.1.1 | Tomato | cytosol | 26.01 | 28.3 |
| Solyc12g044670.1.1 | Tomato | plastid | 24.28 | 27.27 |
| Solyc03g121220.2.1 | Tomato | cytosol, mitochondrion, nucleus, plastid | 23.7 | 25.79 |
| Solyc06g074500.1.1 | Tomato | cytosol | 22.54 | 25.74 |
| Solyc09g009280.1.1 | Tomato | cytosol, peroxisome, plastid | 20.52 | 24.15 |
| Solyc12g015900.1.1 | Tomato | cytosol | 20.52 | 23.83 |
| Solyc11g066930.1.1 | Tomato | nucleus, plastid | 21.1 | 22.88 |
Protein Annotations
| EnsemblPlants:Solyc01g097830.2.1 | EnsemblPlantsGene:Solyc01g097830.2 | InterPro:DUF868_pln | PANTHER:PTHR31972 | PANTHER:PTHR31972:SF6 | PFAM:PF05910 |
| SEG:seg | UniParc:UPI0002768211 | UniProt:K4B0H0 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr1:-:88528724..88529990
Molecular Weight (calculated)
38667.4 Da
IEP (calculated)
9.031
GRAVY (calculated)
-0.201
Length
346 amino acids
Sequence
(BLAST)
(BLAST)
001: MKNMIPACFN IPHNSEDSET TSASPPPSQV PQNLVTCIYQ AQICGSPVYL TLTWSKNLFS HSLLVHAPDL ISITIPLHQS SFAIFKARPG SKSVHPVQLH
101: DRKKMKVHWD FTLAKFNQNS AEPEGCFYIA ITCNARLEFF LGDMLTELTG RARLVSGCCT GDLTLLSRRE HVFGRRSYTT RARIMGVKHE FVIECAGGVL
201: KVKVDGKTSL VVKRIGWKFR GNERILVGQV EVTFFWDVFN WVNKNCDNHK FRHGHEHGVF VFQVGDGGVW PEMGGAEKKL MRKSLSATAG TMSTPLSVSL
301: SPSPSCSSVL QWAEENSECG RSSWSSIRSY GSNEGFSLLL YAWRKD
101: DRKKMKVHWD FTLAKFNQNS AEPEGCFYIA ITCNARLEFF LGDMLTELTG RARLVSGCCT GDLTLLSRRE HVFGRRSYTT RARIMGVKHE FVIECAGGVL
201: KVKVDGKTSL VVKRIGWKFR GNERILVGQV EVTFFWDVFN WVNKNCDNHK FRHGHEHGVF VFQVGDGGVW PEMGGAEKKL MRKSLSATAG TMSTPLSVSL
301: SPSPSCSSVL QWAEENSECG RSSWSSIRSY GSNEGFSLLL YAWRKD
001: MSPSWLRPTA DHNHPPPQPP SQSPSPLSSG DPNLTTCLYQ TDHGVFYLTW SRTFLGGHSV NLFLHSQDYY NHSSPLSFSS ADLSLSSAVS FHLNLNTLAF
101: WKKRGSRFVS PKIQVFWDLS KAKFDSGSEP RSGFYIAVVV DGEMGLLVGD SVKEAYARAK SAKPPTNPQA LLLRKEHVFG ARVFTTKARF GGKNREISID
201: CRVDEDAKLC FSVDSKQVLQ IKRLRWKFRG NEKVEIDGVH VQISWDVYNW LFQSKSSGDG GGGGGHAVFM FRFESDPEAE EVCETKRKEE EDEKNRNGIV
301: LWKPKKQCGN SFGIKGIVEW RKMRKRFVKS KRSSSSSSIS MSSASSACSS SVMEWASSAD EAEYGGGGCS GSGSGNGLGF SLLVYAWIK
101: WKKRGSRFVS PKIQVFWDLS KAKFDSGSEP RSGFYIAVVV DGEMGLLVGD SVKEAYARAK SAKPPTNPQA LLLRKEHVFG ARVFTTKARF GGKNREISID
201: CRVDEDAKLC FSVDSKQVLQ IKRLRWKFRG NEKVEIDGVH VQISWDVYNW LFQSKSSGDG GGGGGHAVFM FRFESDPEAE EVCETKRKEE EDEKNRNGIV
301: LWKPKKQCGN SFGIKGIVEW RKMRKRFVKS KRSSSSSSIS MSSASSACSS SVMEWASSAD EAEYGGGGCS GSGSGNGLGF SLLVYAWIK
Arabidopsis Description
AT5g11000/T30N20_270 [Source:UniProtKB/TrEMBL;Acc:Q9LEU1]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.