Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 7
- cytosol 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH34068 | Soybean | plastid | 68.1 | 67.07 |
| KRG92733 | Soybean | plastid | 67.48 | 66.47 |
| KRH68709 | Soybean | plastid | 61.96 | 66.23 |
| KRG96948 | Soybean | plastid | 62.58 | 65.38 |
| PGSC0003DMT400089872 | Potato | cytosol, peroxisome, plastid | 67.79 | 63.69 |
| Solyc01g097830.2.1 | Tomato | cytosol, nucleus, peroxisome | 66.56 | 62.72 |
| VIT_07s0151g00930.t01 | Wine grape | cytosol, plastid | 32.82 | 35.67 |
| VIT_14s0030g01760.t01 | Wine grape | cytosol, plastid | 28.83 | 32.98 |
| VIT_05s0020g03340.t01 | Wine grape | cytosol | 29.14 | 31.67 |
| VIT_04s0008g05970.t01 | Wine grape | plastid | 34.05 | 29.92 |
| VIT_06s0061g01360.t01 | Wine grape | plastid | 26.38 | 28.76 |
| VIT_01s0137g00740.t01 | Wine grape | cytosol | 26.07 | 28.33 |
| VIT_08s0007g03840.t01 | Wine grape | nucleus | 25.46 | 27.57 |
| VIT_17s0000g09400.t01 | Wine grape | cytosol | 27.3 | 27.05 |
| VIT_12s0057g01390.t01 | Wine grape | mitochondrion | 25.77 | 26.92 |
Protein Annotations
| ArrayExpress:VIT_14s0030g01700 | EMBL:FN596249 | EnsemblPlants:VIT_14s0030g01700.t01 | EnsemblPlantsGene:VIT_14s0030g01700 | EntrezGene:104881414 | InterPro:DUF868_pln |
| PANTHER:PTHR31972 | PANTHER:PTHR31972:SF6 | PFAM:PF05910 | ProteinID:CCB58099 | ProteinID:CCB58099.1 | RefSeq:XP_010659926.1 |
| SEG:seg | unigene:Vvi.23829 | UniParc:UPI0001984A1F | UniProt:F6HTT8 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr14:+:6582133..6586030
Molecular Weight (calculated)
36306.8 Da
IEP (calculated)
8.734
GRAVY (calculated)
-0.222
Length
326 amino acids
Sequence
(BLAST)
(BLAST)
001: MIPACFSSPN TLSNSSQMPQ NLITCIYQTQ LCNSPVHLTL TWSKTLFSHS LTIYAADTFS ITISLYPSTF SFLRNRPGSK SIHLTHHHYQ KIKLYWDFTR
101: AEFSESSAEP ESCFYIAISS NARVEFFLGD LRDEFTQRSG AAWIRHSAEP TLLSRREHVF GRRNYVSRAQ FMGSKHEIGI ECSGGVLKVK VNGETSLVVK
201: RLAWKFRGNE RIMVGGVEVE FFWDVFNWVN NCGANSSGHG VFVFQVGDGG VWPEMVGPEK RLMRKSLSSS ASSALQPISL SPSPSCSSVL QWAEESSDGG
301: RSSCSSTRSS GSGAGFSLLL YAWRRD
101: AEFSESSAEP ESCFYIAISS NARVEFFLGD LRDEFTQRSG AAWIRHSAEP TLLSRREHVF GRRNYVSRAQ FMGSKHEIGI ECSGGVLKVK VNGETSLVVK
201: RLAWKFRGNE RIMVGGVEVE FFWDVFNWVN NCGANSSGHG VFVFQVGDGG VWPEMVGPEK RLMRKSLSSS ASSALQPISL SPSPSCSSVL QWAEESSDGG
301: RSSCSSTRSS GSGAGFSLLL YAWRRD
001: MKDFPSCFGE NGVQVADSSS SSNSGKNAQN LVTCIYQCRI RGRNCLITVT WTKNLMGQSV TVGVDDSCNQ SLCKVEIKPW LFTKRKGSKS LEAYSCNIDV
101: FWDLSSAKFG SGPEALGGFY VGVVVDKEMV LLLGDMKKEA FKKTNASPSS LGAVFIAKKE HVFGKRVFAT KAQLFADGKF HDLLIECDTN VTDPCLVVRV
201: DGKTLLQVKR LKWKFRGNDT IVVNKMTVEV LWDVHSWLFG LPTTGNAVFM FRTCQSTEKS LSFSQDVTTT NSKSHSFGFS LILYAWKSE
101: FWDLSSAKFG SGPEALGGFY VGVVVDKEMV LLLGDMKKEA FKKTNASPSS LGAVFIAKKE HVFGKRVFAT KAQLFADGKF HDLLIECDTN VTDPCLVVRV
201: DGKTLLQVKR LKWKFRGNDT IVVNKMTVEV LWDVHSWLFG LPTTGNAVFM FRTCQSTEKS LSFSQDVTTT NSKSHSFGFS LILYAWKSE
Arabidopsis Description
At5g28150/T24G3_80 [Source:UniProtKB/TrEMBL;Acc:Q8RX84]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.