Factsheet for VIT_01s0137g00740.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_17s0000g09400.t01	Wine grape	cytosol	75.67	69.0
GSMUA_AchrUn_...	Banana	plastid	54.33	58.01
GSMUA_Achr10P...	Banana	cytosol	54.33	51.26
Zm00001d042425_P001	Maize	plastid	51.67	49.84
HORVU3Hr1G092470.1	Barley	plastid	51.33	48.89
TraesCS3A01G415900.1	Wheat	plastid	51.67	48.74
TraesCS3B01G451100.1	Wheat	plastid	51.33	48.12
EES04078	Sorghum	plastid	51.67	47.84
TraesCS3D01G411600.1	Wheat	plastid	51.67	47.84
Os01t0909400-01	Rice	cytosol, plastid	51.67	47.69
VIT_12s0057g01390.t01	Wine grape	mitochondrion	46.33	44.55
Os05t0108400-01	Rice	cytosol	43.67	42.81
TraesCS1D01G026300.1	Wheat	cytosol	42.0	41.45
TraesCS1A01G026000.1	Wheat	cytosol	42.0	41.45
Zm00001d035694_P001	Maize	cytosol	42.0	41.45
TraesCS1B01G032400.1	Wheat	cytosol	42.0	41.31
VIT_07s0151g00930.t01	Wine grape	cytosol, plastid	37.0	37.0
VIT_14s0030g01760.t01	Wine grape	cytosol, plastid	34.67	36.49
VIT_05s0020g03340.t01	Wine grape	cytosol	36.33	36.33
KXG21057	Sorghum	mitochondrion	42.33	33.16
VIT_06s0061g01360.t01	Wine grape	plastid	31.67	31.77
VIT_08s0007g03840.t01	Wine grape	nucleus	26.33	26.25
VIT_14s0030g01700.t01	Wine grape	plastid	28.33	26.07
VIT_04s0008g05970.t01	Wine grape	plastid	31.0	25.07

Protein Annotations

ArrayExpress:VIT_01s0137g00740	EMBL:FN594954	EnsemblPlants:VIT_01s0137g00740.t01	EnsemblPlantsGene:VIT_01s0137g00740	InterPro:DUF868_pln	PANTHER:PTHR31972
PANTHER:PTHR31972:SF11	PFAM:PF05910	ProteinID:CCB43983	ProteinID:CCB43983.1	UniParc:UPI00015C843E	UniProt:F6GVM1
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr1:-:7246123..7247193

Molecular Weight (calculated)

34149.5 Da

IEP (calculated)

8.215

GRAVY (calculated)

-0.432

Length

300 amino acids

Sequence
(BLAST)

001: MHEAIGIPAC FSSGERAVDD QAAVTRSSQS VFMSVYRTKI AGQCRLITIT WCKDLLLHGL SVSVQGPDGD SHYQSKVELK PWYFWRKQGS KHFTVDGKTV
101: DVVWDLKAAK FNGETEPRSD YYVAIVCEEE VVLLLGDLKK DAYRKTGCRP ALIEPTLVSR KEHLFGKKKF STKVKFHEKG NFHEISIECN NSLNKNSSSG
201: EFDHEMEIRI DGRLANHVKH LQWKFRGNES VYVNKTRVEV YWDVHDWLFS SGPRQGLFIF KPISSSTLLS TQIADSTAGE ECSEGRSSKF CSFLYAWKVE

Best Arabidopsis Sequence Match ( AT4G12690.2 )
(BLAST)

001: MSLRSESSTA EKITEDPVTY KTAQSSVTCI YQAHMVGFWR NVRVLWSKNL MNHSLTVMVT SVQGDMNYCC KVDLKPWHFW YKKGYKSFEV EGNQVDVYWD
101: FRSAKFNGGP EPSSDFYVAL VSEEEVVLLL GDHKKKAFKR TKSRPSLVDA ALFYKKENVF GKKIFSTRAK FHDRKREHEI VVESSTGAKE PEMWISVDGI
201: VLVQVRNLQW KFRGNQTVLV DKEPVQVFWD VYDWLFSTPG TGHGLFIFKP ESGESETSNE TKNCSASSSS SSSEFCLFLY AWKLE

Arabidopsis Description

At4g12690 [Source:UniProtKB/TrEMBL;Acc:Q9SU17]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.