Factsheet for VIT_07s0151g00930.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 3
cytosol 3
peroxisome 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0030g01760.t01	Wine grape	cytosol, plastid	72.0	75.79
KRG95548	Soybean	cytosol	76.0	75.75
KRH71412	Soybean	cytosol	75.0	74.75
KRH32026	Soybean	cytosol, plastid	74.33	74.33
VIT_05s0020g03340.t01	Wine grape	cytosol	70.67	70.67
KRH67230	Soybean	cytosol	73.67	70.61
GSMUA_Achr7P07540_001	Banana	endoplasmic reticulum, nucleus, peroxisome, plastid	61.33	70.5
GSMUA_Achr5P24690_001	Banana	cytosol	66.67	68.97
GSMUA_Achr7P01840_001	Banana	cytosol, peroxisome, plastid	59.33	67.42
EER93250	Sorghum	cytosol, plastid	63.67	65.64
Zm00001d013042_P001	Maize	plastid	63.67	65.64
Os03t0806700-01	Rice	cytosol, endoplasmic reticulum, peroxisome, plastid	63.67	65.64
HORVU5Hr1G109570.1	Barley	cytosol, plastid	63.33	65.07
TraesCS5A01G456500.1	Wheat	plastid	63.0	64.73
Zm00001d034527_P001	Maize	plastid	63.0	64.29
TraesCS5D01G467300.1	Wheat	cytosol, plastid	62.67	61.04
Os07t0572300-01	Rice	plastid	55.33	58.45
HORVU2Hr1G038060.1	Barley	plastid	52.33	56.07
TraesCS5B01G465500.1	Wheat	plastid	62.67	55.95
Zm00001d021869_P001	Maize	plastid	52.0	54.93
TraesCS2D01G204300.1	Wheat	plastid	51.67	54.77
TraesCS2B01G223900.1	Wheat	plastid	51.67	54.77
TraesCS2A01G196200.1	Wheat	plastid	50.33	53.36
OQU90135	Sorghum	plastid	53.0	46.76
VIT_06s0061g01360.t01	Wine grape	plastid	45.0	45.15
VIT_08s0007g03840.t01	Wine grape	nucleus	38.33	38.21
VIT_17s0000g09400.t01	Wine grape	cytosol	41.67	37.99
VIT_12s0057g01390.t01	Wine grape	mitochondrion	39.0	37.5
VIT_01s0137g00740.t01	Wine grape	cytosol	37.0	37.0
VIT_14s0030g01700.t01	Wine grape	plastid	35.67	32.82
VIT_04s0008g05970.t01	Wine grape	plastid	40.0	32.34

Protein Annotations

ArrayExpress:VIT_07s0151g00930	EMBL:AM462218	EMBL:FN595764	EnsemblPlants:VIT_07s0151g00930.t01	EnsemblPlantsGene:VIT_07s0151g00930	EntrezGene:100853449
EntrezGene:LOC100853449	InterPro:DUF868_pln	PANTHER:PTHR31972	PANTHER:PTHR31972:SF13	PFAM:PF05910	ProteinID:CAN61445
ProteinID:CAN61445.1	ProteinID:CCB51891	ProteinID:CCB51891.1	RefSeq:XP_003632331	RefSeq:XP_003632331.1	SEG:seg
UniParc:UPI00015CA44F	UniProt:F6HI45	wikigene:100853449	wikigene:LOC100853449	MapMan:35.2	:

Description

No Description!

Coordinates

chr7:+:1153046..1154022

Molecular Weight (calculated)

33824.0 Da

IEP (calculated)

8.109

GRAVY (calculated)

-0.048

Length

300 amino acids

Sequence
(BLAST)

001: MRDFPSCFGE NGVQVADSSS SSTARTAQNL VTCVYQCRLR GKWCLITITW TKNLMGQGLS VGIDDSSNQC LCKVDIKPWL FSKRKGCKNL EVDSSKIDMY
101: WDLSAAKFGS GPEPLEGFYL AVVFNQELAL LLGDLKKEAC KKINSPPVPS TAVLIAKREH LFGKRLYFAK AQFCDKGQMH DIMIECDTVG VTEPCLLIRI
201: DSKMVMQVKR LQWKFRGNHT ILVDGLPIEV FWDVHNWLFG NAIGNAVFMF QSCLSAEKLW ACQSISSDPS VLAWSWSEKF RDTQLQGLGF SLILYAWKNE

Best Arabidopsis Sequence Match ( AT5G28150.1 )
(BLAST)

001: MKDFPSCFGE NGVQVADSSS SSNSGKNAQN LVTCIYQCRI RGRNCLITVT WTKNLMGQSV TVGVDDSCNQ SLCKVEIKPW LFTKRKGSKS LEAYSCNIDV
101: FWDLSSAKFG SGPEALGGFY VGVVVDKEMV LLLGDMKKEA FKKTNASPSS LGAVFIAKKE HVFGKRVFAT KAQLFADGKF HDLLIECDTN VTDPCLVVRV
201: DGKTLLQVKR LKWKFRGNDT IVVNKMTVEV LWDVHSWLFG LPTTGNAVFM FRTCQSTEKS LSFSQDVTTT NSKSHSFGFS LILYAWKSE

Arabidopsis Description

At5g28150/T24G3_80 [Source:UniProtKB/TrEMBL;Acc:Q8RX84]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.