Factsheet for GSMUA_AchrUn_randomP00710_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	plastid
Plant-mPloc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH03859	Soybean	cytosol	52.31	54.85
VIT_01s0137g00740.t01	Wine grape	cytosol	58.01	54.33
Solyc03g112130.1.1	Tomato	cytosol	60.85	53.77
PGSC0003DMT400046694	Potato	cytosol	60.85	53.6
KRH57148	Soybean	cytosol	61.21	52.76
VIT_17s0000g09400.t01	Wine grape	cytosol	59.43	50.76
GSMUA_Achr10P...	Banana	cytosol	56.58	50.0
KRH63641	Soybean	cytosol	57.65	49.69
KRH54304	Soybean	cytosol	57.65	49.69
Os05t0108400-01	Rice	cytosol	47.69	43.79
TraesCS1D01G026300.1	Wheat	cytosol	46.98	43.42
TraesCS1A01G026000.1	Wheat	cytosol	46.98	43.42
GSMUA_AchrUn_...	Banana	cytosol	43.06	43.37
TraesCS1B01G032400.1	Wheat	cytosol	46.98	43.28
GSMUA_Achr3P12010_001	Banana	cytosol	40.93	41.67
Zm00001d035694_P001	Maize	cytosol	44.84	41.45
GSMUA_Achr7P01840_001	Banana	cytosol, peroxisome, plastid	37.72	40.15
GSMUA_Achr5P24690_001	Banana	cytosol	40.93	39.66
GSMUA_Achr7P07540_001	Banana	endoplasmic reticulum, nucleus, peroxisome, plastid	36.65	39.46
KXG21057	Sorghum	mitochondrion	45.2	33.16
GSMUA_Achr3P03050_001	Banana	nucleus	31.32	29.93
GSMUA_Achr8P29560_001	Banana	nucleus	29.89	28.47
GSMUA_Achr10P...	Banana	nucleus, plastid	30.61	28.2
GSMUA_Achr11P...	Banana	plastid	28.83	27.93
GSMUA_Achr8P07610_001	Banana	cytosol	28.47	27.78
GSMUA_Achr2P20270_001	Banana	cytosol	29.54	27.12
GSMUA_Achr9P13220_001	Banana	mitochondrion, peroxisome, plastid	29.18	21.58
GSMUA_Achr10P...	Banana	cytosol, golgi, plastid	30.61	21.13
GSMUA_Achr5P22830_001	Banana	cytosol, nucleus, peroxisome	28.83	20.82
GSMUA_Achr3P04550_001	Banana	plastid	15.3	16.17

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP00710_001	EnsemblPlants:GSMUA_AchrUn_randomT00710_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG00710_001	InterPro:DUF868_pln	PANTHER:PTHR31972	PANTHER:PTHR31972:SF12
PFAM:PF05910	SEG:seg	UniParc:UPI0002964BC4	UniProt:M0U583	MapMan:35.2	:

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG00710_001]

Coordinates

chrchrUn_random:-:2998073..2998990

Molecular Weight (calculated)

31378.4 Da

IEP (calculated)

8.927

GRAVY (calculated)

-0.300

Length

281 amino acids

Sequence
(BLAST)

001: MQDLFPVPSC FSSGEKLSQD VLPAATAAAA TRSRQSMVVS VYRSRVAGHC RLVTVTWCKN LLAHGLSVSQ QHSCKVQISP WQPWRKQGSN RFQIGGETVE
101: VFWDLHSAKF CNEPEPQSDY YVAVVSEGEV VLLLGDLRKE AYRRTSSRPS LTEAVLVARK EHVFGKKRFA TKSRFHDKGS RHEISVECSN GGGGGNMDLD
201: MEIKIDGNVV IHVKHLQWKF RGNDSISIDK RRVEVYWDVH GWLFASGLRH ALFIFKPESL SSAGGGGGDS CCLFLHAWKL D

Best Arabidopsis Sequence Match ( AT4G12690.2 )
(BLAST)

001: MSLRSESSTA EKITEDPVTY KTAQSSVTCI YQAHMVGFWR NVRVLWSKNL MNHSLTVMVT SVQGDMNYCC KVDLKPWHFW YKKGYKSFEV EGNQVDVYWD
101: FRSAKFNGGP EPSSDFYVAL VSEEEVVLLL GDHKKKAFKR TKSRPSLVDA ALFYKKENVF GKKIFSTRAK FHDRKREHEI VVESSTGAKE PEMWISVDGI
201: VLVQVRNLQW KFRGNQTVLV DKEPVQVFWD VYDWLFSTPG TGHGLFIFKP ESGESETSNE TKNCSASSSS SSSEFCLFLY AWKLE

Arabidopsis Description

At4g12690 [Source:UniProtKB/TrEMBL;Acc:Q9SU17]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.