Factsheet for GSMUA_Achr3P03050_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	nucleus, plastid	73.13	70.49
GSMUA_Achr2P20270_001	Banana	cytosol	71.77	68.95
GSMUA_Achr8P29560_001	Banana	nucleus	62.59	62.37
GSMUA_Achr11P...	Banana	plastid	53.06	53.79
GSMUA_Achr8P07610_001	Banana	cytosol	46.94	47.92
VIT_06s0061g01360.t01	Wine grape	plastid	47.96	47.16
VIT_08s0007g03840.t01	Wine grape	nucleus	46.94	45.85
KRH67854	Soybean	cytosol	45.58	43.51
KRH26585	Soybean	plastid	44.22	43.19
KRH22720	Soybean	plastid	44.22	43.05
KRG96144	Soybean	nucleus	44.9	43.0
Solyc06g074500.1.1	Tomato	cytosol	44.22	42.9
PGSC0003DMT400018411	Potato	cytosol	43.88	42.57
PGSC0003DMT400006889	Potato	nucleus	21.77	41.83
TraesCS2D01G290200.1	Wheat	cytosol	45.92	40.66
TraesCS2B01G308700.1	Wheat	cytosol	45.92	40.3
TraesCS2A01G292300.1	Wheat	cytosol	45.58	39.53
KRH25175	Soybean	cytosol	42.52	39.43
Zm00001d003829_P001	Maize	cytosol, nucleus, peroxisome	45.92	39.24
Zm00001d025337_P001	Maize	cytosol	45.92	39.13
Solyc09g009280.1.1	Tomato	cytosol, peroxisome, plastid	39.12	39.12
AT2G27770.1	Thale cress	plastid	42.18	38.75
TraesCS7A01G277900.1	Wheat	plastid	39.12	38.72
CDX77134	Canola	cytosol, plastid	42.52	38.7
Solyc11g066930.1.1	Tomato	nucleus, plastid	41.84	38.56
TraesCS5B01G130100.1	Wheat	plastid	41.5	38.49
Bra034367.1-P	Field mustard	plastid	42.18	38.15
KRH30504	Soybean	plastid	42.18	38.15
TraesCS7D01G277700.1	Wheat	plastid	39.12	38.08
HORVU7Hr1G058790.3	Barley	plastid	39.12	37.95
TraesCS5A01G130200.1	Wheat	plastid	40.48	37.78
TraesCS7B01G175700.1	Wheat	plastid	38.78	37.75
TraesCS5D01G137700.1	Wheat	plastid	40.82	37.38
Bra023071.1-P	Field mustard	cytosol	40.82	37.38
CDX84556	Canola	cytosol	40.82	37.38
CDX79683	Canola	cytosol	39.8	36.91
Os04t0407500-00	Rice	cytosol, plastid	31.29	36.8
GSMUA_Achr7P07540_001	Banana	endoplasmic reticulum, nucleus, peroxisome, plastid	32.65	36.78
KXG26216	Sorghum	cytosol	46.6	36.73
HORVU5Hr1G041450.1	Barley	plastid	40.14	36.65
CDY30531	Canola	plastid	40.82	36.59
KXG22966	Sorghum	plastid	40.48	36.39
OQU82880	Sorghum	plastid	40.48	36.17
TraesCS4A01G183900.1	Wheat	plastid	38.44	35.87
AT2G36470.1	Thale cress	nucleus	39.8	35.78
TraesCS4B01G134800.1	Wheat	plastid	38.44	35.76
Zm00001d052520_P001	Maize	plastid	38.78	35.74
TraesCS4D01G129600.1	Wheat	plastid	38.44	35.53
Zm00001d004919_P001	Maize	plastid	38.78	35.29
GSMUA_Achr5P24690_001	Banana	cytosol	34.35	34.83
Zm00001d031962_P001	Maize	plastid	37.41	34.81
Os12t0149000-01	Rice	plastid	38.78	34.76
GSMUA_Achr7P01840_001	Banana	cytosol, peroxisome, plastid	29.59	32.95
HORVU4Hr1G001870.2	Barley	cytosol	37.07	31.69
GSMUA_AchrUn_...	Banana	plastid	29.93	31.32
TraesCS4A01G302100.1	Wheat	cytosol	36.73	30.51
TraesCS4B01G012200.1	Wheat	cytosol	36.39	30.31
TraesCS4D01G010300.1	Wheat	cytosol	36.05	30.2
GSMUA_Achr10P...	Banana	cytosol	31.63	29.25
CDY33155	Canola	cytosol	37.07	27.25
GSMUA_AchrUn_...	Banana	cytosol	25.51	26.88
GSMUA_Achr3P12010_001	Banana	cytosol	21.77	23.19
GSMUA_Achr5P22830_001	Banana	cytosol, nucleus, peroxisome	28.91	21.85
GSMUA_Achr9P13220_001	Banana	mitochondrion, peroxisome, plastid	27.89	21.58
GSMUA_Achr10P...	Banana	cytosol, golgi, plastid	28.23	20.39
GSMUA_Achr3P04550_001	Banana	plastid	16.33	18.05

Protein Annotations

EnsemblPlants:GSMUA_Achr3P03050_001	EnsemblPlants:GSMUA_Achr3T03050_001	EnsemblPlantsGene:GSMUA_Achr3G03050_001	InterPro:DUF868_pln	PANTHER:PTHR31972	PANTHER:PTHR31972:SF16
PFAM:PF05910	SEG:seg	UniParc:UPI0002968718	UniProt:M0SBC3	MapMan:35.2	:

Description

Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr3G03050_001]

Coordinates

chr3:+:1988803..1989687

Molecular Weight (calculated)

32705.7 Da

IEP (calculated)

6.906

GRAVY (calculated)

-0.270

Length

294 amino acids

Sequence
(BLAST)

001: MKDLASCFGE HAVKVSDTSC SGSSSSGNSS VIDNATSVLS AVTCVYRTRL SAQQELLIRV TWSKGHVSPT LSVGVDDDPS NPMVHELPLR KKKGSRTCIA
101: GDFVVAVHWD ISSAKYGSGP EPSDGFYIVM VVNSELALLL GDMSKDYMRM SEETLPVAEF SMISRREQVI GHAIHSTRAR FRDDGSDHEI TIKCKGDGWD
201: SRDSELSVSV DKKKVVHVRS LRWNFRGNHT IFVDGSPVDM MWDVHDWWFS SSSGSAVFMF RARSTLDSRL WLEEMLHKEQ GTSRFSLLIQ AFKG

Best Arabidopsis Sequence Match ( AT2G27770.1 )
(BLAST)

001: MRDLVSCFSE NSINVTHPLS ISSSSSSCSK YSTNNVCISP SLIPSIQTSI TSIYRITLSK HLIIKVTWCN PHNNNGLSIS VASADQNPST TLKLNTSSRF
101: FRKKKGNKSV DSDLGKIEVF WDLSSAKYDS NLCGPEPING FYVIVLVDGQ MGLLLGDSSE ETLRKKGFSG DIGFDFSLVS RQEHFTGNNT FYSTKVRFVE
201: TGDSHEIVIR CNKETEGLKQ SNHYPVLSVC IDKKTVIKVK RLQWNFRGNQ TIFLDGLLVD LMWDVHDWFF SNQGACGRAV FMFRTRNGLD SSRLWLEEKI
301: VKKDQQDKLD FSLFIYACKT

Arabidopsis Description

At2g27770 [Source:UniProtKB/TrEMBL;Acc:Q9ZUX8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.