Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G010300.1 | Wheat | cytosol | 89.53 | 87.75 |
| TraesCS4A01G302100.1 | Wheat | cytosol | 87.79 | 85.31 |
| TraesCS4B01G012200.1 | Wheat | cytosol | 86.92 | 84.7 |
| HORVU7Hr1G058790.3 | Barley | plastid | 49.42 | 56.11 |
| GSMUA_Achr8P07610_001 | Banana | cytosol | 32.85 | 39.24 |
| GSMUA_Achr10P... | Banana | nucleus, plastid | 33.43 | 37.7 |
| GSMUA_Achr8P29560_001 | Banana | nucleus | 32.27 | 37.63 |
| GSMUA_Achr3P03050_001 | Banana | nucleus | 31.69 | 37.07 |
| GSMUA_Achr11P... | Banana | plastid | 30.81 | 36.55 |
| GSMUA_Achr2P20270_001 | Banana | cytosol | 31.1 | 34.97 |
| HORVU5Hr1G041450.1 | Barley | plastid | 31.98 | 34.16 |
| VIT_06s0061g01360.t01 | Wine grape | plastid | 27.62 | 31.77 |
| KRH26585 | Soybean | plastid | 26.74 | 30.56 |
| PGSC0003DMT400006889 | Potato | nucleus | 13.37 | 30.07 |
| VIT_08s0007g03840.t01 | Wine grape | nucleus | 26.16 | 29.9 |
| KRH22720 | Soybean | plastid | 26.16 | 29.8 |
| HORVU5Hr1G109570.1 | Barley | cytosol, plastid | 25.0 | 29.45 |
| AT2G27770.1 | Thale cress | plastid | 27.33 | 29.38 |
| PGSC0003DMT400018411 | Potato | cytosol | 25.87 | 29.37 |
| Solyc06g074500.1.1 | Tomato | cytosol | 25.58 | 29.04 |
| CDX77134 | Canola | cytosol, plastid | 27.03 | 28.79 |
| KRH25175 | Soybean | cytosol | 25.87 | 28.08 |
| CDY30531 | Canola | plastid | 26.74 | 28.05 |
| Bra034367.1-P | Field mustard | plastid | 26.45 | 28.0 |
| KRH67854 | Soybean | cytosol | 25.0 | 27.92 |
| KRH30504 | Soybean | plastid | 26.16 | 27.69 |
| KRG96144 | Soybean | nucleus | 24.71 | 27.69 |
| Solyc09g009280.1.1 | Tomato | cytosol, peroxisome, plastid | 22.97 | 26.87 |
| HORVU2Hr1G038060.1 | Barley | plastid | 21.22 | 26.07 |
| Solyc11g066930.1.1 | Tomato | nucleus, plastid | 23.55 | 25.39 |
| HORVU3Hr1G092470.1 | Barley | plastid | 22.38 | 24.44 |
| CDX79683 | Canola | cytosol | 21.51 | 23.34 |
| CDX84556 | Canola | cytosol | 21.22 | 22.74 |
| Bra023071.1-P | Field mustard | cytosol | 21.22 | 22.74 |
| AT2G36470.1 | Thale cress | nucleus | 21.22 | 22.32 |
| HORVU6Hr1G032720.1 | Barley | cytosol | 17.44 | 19.05 |
| HORVU7Hr1G029920.1 | Barley | mitochondrion | 20.93 | 18.09 |
| CDY33155 | Canola | cytosol | 20.64 | 17.75 |
| HORVU5Hr1G065520.1 | Barley | plastid | 21.51 | 16.37 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G001870.2 | EnsemblPlantsGene:HORVU4Hr1G001870 | InterPro:DUF868_pln | PANTHER:PTHR31972 | PANTHER:PTHR31972:SF39 | PFAM:PF05910 |
| SEG:seg | UniParc:UPI000B488BAB | UniProt:A0A287MX14 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chrchr4H:-:3174532..3176657
Molecular Weight (calculated)
36630.5 Da
IEP (calculated)
9.788
GRAVY (calculated)
-0.295
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MRKDFSCFRD GAVTTLAVAE PGSPADRLDR SLQAATACVY RVALLAASRK DLLVTVTWTR RSVVSVADAA AAGATGLSVA VEEVQAEAPP KQKLLPSPAT
101: PRRSAVVKPA AAGTAQQRVM HLMQKKRGTR SFVTEGGTAV AVHWDTSEAK YAAASPEPCG GEYHLAVVAD AELALLLGAG AAREELSRRX XXRPRAVLVS
201: RREQLRASAA EASVAHSTRC RFRDGGAEHE VTVRCRGDRR GEQQQEGEVA VSVDGKSIVE ARRVGWNFRG NRTAVLGDGA VVEVMWDVHD WWFSGARTGG
301: AAQFMVKARG PGPADGGRVW MDEELASKGQ PPDGFFLHMQ CYRR
101: PRRSAVVKPA AAGTAQQRVM HLMQKKRGTR SFVTEGGTAV AVHWDTSEAK YAAASPEPCG GEYHLAVVAD AELALLLGAG AAREELSRRX XXRPRAVLVS
201: RREQLRASAA EASVAHSTRC RFRDGGAEHE VTVRCRGDRR GEQQQEGEVA VSVDGKSIVE ARRVGWNFRG NRTAVLGDGA VVEVMWDVHD WWFSGARTGG
301: AAQFMVKARG PGPADGGRVW MDEELASKGQ PPDGFFLHMQ CYRR
001: MRDLVSCFSE NSINVTHPLS ISSSSSSCSK YSTNNVCISP SLIPSIQTSI TSIYRITLSK HLIIKVTWCN PHNNNGLSIS VASADQNPST TLKLNTSSRF
101: FRKKKGNKSV DSDLGKIEVF WDLSSAKYDS NLCGPEPING FYVIVLVDGQ MGLLLGDSSE ETLRKKGFSG DIGFDFSLVS RQEHFTGNNT FYSTKVRFVE
201: TGDSHEIVIR CNKETEGLKQ SNHYPVLSVC IDKKTVIKVK RLQWNFRGNQ TIFLDGLLVD LMWDVHDWFF SNQGACGRAV FMFRTRNGLD SSRLWLEEKI
301: VKKDQQDKLD FSLFIYACKT
101: FRKKKGNKSV DSDLGKIEVF WDLSSAKYDS NLCGPEPING FYVIVLVDGQ MGLLLGDSSE ETLRKKGFSG DIGFDFSLVS RQEHFTGNNT FYSTKVRFVE
201: TGDSHEIVIR CNKETEGLKQ SNHYPVLSVC IDKKTVIKVK RLQWNFRGNQ TIFLDGLLVD LMWDVHDWFF SNQGACGRAV FMFRTRNGLD SSRLWLEEKI
301: VKKDQQDKLD FSLFIYACKT
Arabidopsis Description
At2g27770 [Source:UniProtKB/TrEMBL;Acc:Q9ZUX8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.