Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- plasma membrane 1
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g074500.1.1 | Tomato | cytosol | 96.04 | 96.04 |
| VIT_06s0061g01360.t01 | Wine grape | plastid | 68.65 | 69.57 |
| KRH26585 | Soybean | plastid | 60.73 | 61.13 |
| KRH22720 | Soybean | plastid | 59.41 | 59.6 |
| KRH25175 | Soybean | cytosol | 60.73 | 58.04 |
| KRH30504 | Soybean | plastid | 61.06 | 56.92 |
| PGSC0003DMT400006889 | Potato | nucleus | 28.38 | 56.21 |
| AT2G27770.1 | Thale cress | plastid | 55.45 | 52.5 |
| CDX77134 | Canola | cytosol, plastid | 55.12 | 51.7 |
| Bra034367.1-P | Field mustard | plastid | 55.12 | 51.38 |
| CDY30531 | Canola | plastid | 54.13 | 50.0 |
| GSMUA_Achr10P... | Banana | nucleus, plastid | 44.88 | 44.59 |
| GSMUA_Achr3P03050_001 | Banana | nucleus | 42.57 | 43.88 |
| GSMUA_Achr8P29560_001 | Banana | nucleus | 42.24 | 43.39 |
| GSMUA_Achr2P20270_001 | Banana | cytosol | 43.23 | 42.81 |
| GSMUA_Achr11P... | Banana | plastid | 39.93 | 41.72 |
| GSMUA_Achr8P07610_001 | Banana | cytosol | 36.96 | 38.89 |
| PGSC0003DMT400057872 | Potato | cytosol | 38.28 | 38.8 |
| PGSC0003DMT400077341 | Potato | cytosol, peroxisome, plasma membrane | 36.96 | 36.96 |
| TraesCS7A01G277900.1 | Wheat | plastid | 30.69 | 31.31 |
| TraesCS7D01G277700.1 | Wheat | plastid | 31.02 | 31.13 |
| PGSC0003DMT400046694 | Potato | cytosol | 32.34 | 30.72 |
| TraesCS5B01G130100.1 | Wheat | plastid | 31.68 | 30.28 |
| TraesCS5A01G130200.1 | Wheat | plastid | 31.35 | 30.16 |
| TraesCS7B01G175700.1 | Wheat | plastid | 30.03 | 30.13 |
| HORVU5Hr1G041450.1 | Barley | plastid | 32.01 | 30.12 |
| HORVU7Hr1G058790.3 | Barley | plastid | 30.03 | 30.03 |
| Os12t0149000-01 | Rice | plastid | 32.01 | 29.57 |
| TraesCS5D01G137700.1 | Wheat | plastid | 31.02 | 29.28 |
| Os04t0407500-00 | Rice | cytosol, plastid | 23.76 | 28.8 |
| TraesCS2D01G290200.1 | Wheat | cytosol | 31.35 | 28.61 |
| KXG22966 | Sorghum | plastid | 30.69 | 28.44 |
| Zm00001d025337_P001 | Maize | cytosol | 32.34 | 28.41 |
| TraesCS2B01G308700.1 | Wheat | cytosol | 31.02 | 28.06 |
| Zm00001d052520_P001 | Maize | plastid | 29.37 | 27.9 |
| Zm00001d003829_P001 | Maize | cytosol, nucleus, peroxisome | 31.35 | 27.62 |
| Zm00001d031962_P001 | Maize | plastid | 28.71 | 27.53 |
| TraesCS4A01G183900.1 | Wheat | plastid | 28.38 | 27.3 |
| Zm00001d004919_P001 | Maize | plastid | 29.04 | 27.24 |
| TraesCS4B01G134800.1 | Wheat | plastid | 28.38 | 27.22 |
| TraesCS2A01G292300.1 | Wheat | cytosol | 30.36 | 27.14 |
| OQU82880 | Sorghum | plastid | 29.37 | 27.05 |
| TraesCS4D01G129600.1 | Wheat | plastid | 27.72 | 26.42 |
| HORVU4Hr1G001870.2 | Barley | cytosol | 29.37 | 25.87 |
| KXG26216 | Sorghum | cytosol | 31.68 | 25.74 |
| PGSC0003DMT400068894 | Potato | plastid | 29.37 | 25.5 |
| TraesCS4D01G010300.1 | Wheat | cytosol | 29.04 | 25.07 |
| TraesCS4B01G012200.1 | Wheat | cytosol | 29.04 | 24.93 |
| PGSC0003DMT400006698 | Potato | mitochondrion | 25.08 | 24.68 |
| TraesCS4A01G302100.1 | Wheat | cytosol | 28.71 | 24.58 |
| PGSC0003DMT400069001 | Potato | plastid | 24.42 | 24.03 |
| PGSC0003DMT400076600 | Potato | cytosol | 23.43 | 23.83 |
| PGSC0003DMT400089872 | Potato | cytosol, peroxisome, plastid | 25.74 | 22.48 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400018411 | EnsemblPlantsGene:PGSC0003DMG400007148 | EntrezGene:107060621 | InterPro:DUF868_pln | PANTHER:PTHR31972 | PANTHER:PTHR31972:SF10 |
| PFAM:PF05910 | PGSC:PGSC0003DMG400007148 | RefSeq:XP_015164191.1 | SEG:seg | UniParc:UPI000294AFDA | UniProt:M1AAK7 |
| MapMan:35.2 | : | : | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400007148]
Coordinates
chr6:-:55088837..55090274
Molecular Weight (calculated)
34507.6 Da
IEP (calculated)
8.547
GRAVY (calculated)
-0.186
Length
303 amino acids
Sequence
(BLAST)
(BLAST)
001: MRDFASCFNE YAVQVSDNTS CSSYSNSACI PPSIIPSVQN TVNCLYKVNL PNKKHVLITI SWCKTNVTQG LSVHFGDDHP NVFKLNMNTR LFRKKKGSKS
101: MDLDNFKVEI IWDLCGARYL SSGPEPIDGY YVLVIVDSQV GLILGDMAEE ASLRKLKNGI PMAKFSLVSR QEHFSGNTIY STKAQFCDNG NIHDVLIRCN
201: GENDGLKHPV LTVYIDKKMV IRVKRLQWNF RGNQSIFLDG LLVDLMWNVH DWFFNPASGI ALFMFRTRSG MDSRLWLDDK DKFLIKDQEK VEFSLLIYAS
301: KST
101: MDLDNFKVEI IWDLCGARYL SSGPEPIDGY YVLVIVDSQV GLILGDMAEE ASLRKLKNGI PMAKFSLVSR QEHFSGNTIY STKAQFCDNG NIHDVLIRCN
201: GENDGLKHPV LTVYIDKKMV IRVKRLQWNF RGNQSIFLDG LLVDLMWNVH DWFFNPASGI ALFMFRTRSG MDSRLWLDDK DKFLIKDQEK VEFSLLIYAS
301: KST
001: MRDLVSCFSE NSINVTHPLS ISSSSSSCSK YSTNNVCISP SLIPSIQTSI TSIYRITLSK HLIIKVTWCN PHNNNGLSIS VASADQNPST TLKLNTSSRF
101: FRKKKGNKSV DSDLGKIEVF WDLSSAKYDS NLCGPEPING FYVIVLVDGQ MGLLLGDSSE ETLRKKGFSG DIGFDFSLVS RQEHFTGNNT FYSTKVRFVE
201: TGDSHEIVIR CNKETEGLKQ SNHYPVLSVC IDKKTVIKVK RLQWNFRGNQ TIFLDGLLVD LMWDVHDWFF SNQGACGRAV FMFRTRNGLD SSRLWLEEKI
301: VKKDQQDKLD FSLFIYACKT
101: FRKKKGNKSV DSDLGKIEVF WDLSSAKYDS NLCGPEPING FYVIVLVDGQ MGLLLGDSSE ETLRKKGFSG DIGFDFSLVS RQEHFTGNNT FYSTKVRFVE
201: TGDSHEIVIR CNKETEGLKQ SNHYPVLSVC IDKKTVIKVK RLQWNFRGNQ TIFLDGLLVD LMWDVHDWFF SNQGACGRAV FMFRTRNGLD SSRLWLEEKI
301: VKKDQQDKLD FSLFIYACKT
Arabidopsis Description
At2g27770 [Source:UniProtKB/TrEMBL;Acc:Q9ZUX8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.