Factsheet for HORVU5Hr1G065520.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
mitochondrion 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G224600.1	Wheat	plastid	90.27	98.55
TraesCS5A01G226100.1	Wheat	plastid	89.82	98.07
TraesCS5D01G233300.1	Wheat	plastid	89.16	97.34
Os09t0416600-02	Rice	plastid	72.12	73.42
Zm00001d020470_P001	Maize	plastid	67.92	72.92
Zm00001d005752_P001	Maize	plastid	65.27	70.07
KXG35635	Sorghum	plastid	68.14	69.06
GSMUA_Achr3P04550_001	Banana	plastid	31.42	53.38
GSMUA_Achr9P13220_001	Banana	mitochondrion, peroxisome, plastid	44.03	52.37
GSMUA_Achr5P22830_001	Banana	cytosol, nucleus, peroxisome	40.93	47.56
GSMUA_Achr10P...	Banana	cytosol, golgi, plastid	42.04	46.68
PGSC0003DMT400068894	Potato	plastid	31.42	40.69
VIT_04s0008g05970.t01	Wine grape	plastid	32.96	40.16
Solyc08g028780.1.1	Tomato	mitochondrion	29.87	39.82
KRH52365	Soybean	plastid	29.2	39.64
CDY51100	Canola	cytosol	28.32	37.65
CDX69793	Canola	nucleus	31.19	37.5
Bra008998.1-P	Field mustard	nucleus, peroxisome, plastid	32.08	37.37
CDX97072	Canola	nucleus	31.86	37.21
CDX85733	Canola	cytosol, nucleus, plastid	28.1	37.03
HORVU7Hr1G029920.1	Barley	mitochondrion	32.08	36.43
Bra028555.1-P	Field mustard	nucleus	27.43	36.15
KRH61697	Soybean	plastid	24.78	36.01
AT5G11000.1	Thale cress	cytosol, plastid	30.53	35.48
KRH15788	Soybean	plastid	26.55	35.09
KRH05263	Soybean	mitochondrion, plastid	26.33	35.0
CDY56275	Canola	cytosol	11.73	34.64
CDX76763	Canola	plastid	25.22	32.66
Bra007811.1-P	Field mustard	plastid	24.78	32.0
AT2G25200.1	Thale cress	plastid	25.0	31.92
HORVU5Hr1G109570.1	Barley	cytosol, plastid	20.13	31.16
HORVU2Hr1G038060.1	Barley	plastid	19.03	30.71
HORVU6Hr1G032720.1	Barley	cytosol	19.69	28.25
HORVU3Hr1G092470.1	Barley	plastid	19.47	27.94
HORVU5Hr1G041450.1	Barley	plastid	19.25	27.02
HORVU7Hr1G058790.3	Barley	plastid	17.92	26.73
HORVU4Hr1G001870.2	Barley	cytosol	16.37	21.51

Protein Annotations

EnsemblPlants:HORVU5Hr1G065520.1	EnsemblPlantsGene:HORVU5Hr1G065520	InterPro:DUF868_pln	PANTHER:PTHR31972	PANTHER:PTHR31972:SF14	PFAM:PF05910
SEG:seg	UniParc:UPI000B4749A0	UniProt:A0A287RKG5	MapMan:35.2	:	:

Description

No Description!

Coordinates

chrchr5H:+:501474163..501476279

Molecular Weight (calculated)

49267.8 Da

IEP (calculated)

10.719

GRAVY (calculated)

-0.545

Length

452 amino acids

Sequence
(BLAST)

001: SLAVSLPPNR SEKFPKKLSH FPFQPSHRRR SRSRARARAM PNAIPAFFRA SPGAASGSGA GAGPSLATSV YETRLGLAAL SWSRAAFGLS LRAVLRVGAL
101: ASSSSASDYG CYDDGPELDE EATIAVRVRP WLFWRRRGSK RFHVHDRRID LAWDLTRARF ASPGSPEPSS GYFVAVVVDG EMAVVAGDMT EEAYRKTKAQ
201: RPTGPGHVLV SRREHVSMRD GGHGRGHKTC VKVRGKEREI SLDLVSRGHG KDREMDKDKD KAEVGLSVSV DGERVLHIRR LRWKFRGSEK VDLGGGDRVQ
301: VSWDLHNWLF SAREPALTDA ASVLAAASPP AHAVFVFRFE LGDAGGEERD SAEAKEKELL DKARRGGAGV LSGYLGRWGR GDWSETSSNG ENRRKRGQAR
401: RLAKASSSSS ASVASSSASW ASSSTVMDWA SPEEAELHRG DGFSLLVYAW KS

Best Arabidopsis Sequence Match ( AT5G11000.1 )
(BLAST)

001: MSPSWLRPTA DHNHPPPQPP SQSPSPLSSG DPNLTTCLYQ TDHGVFYLTW SRTFLGGHSV NLFLHSQDYY NHSSPLSFSS ADLSLSSAVS FHLNLNTLAF
101: WKKRGSRFVS PKIQVFWDLS KAKFDSGSEP RSGFYIAVVV DGEMGLLVGD SVKEAYARAK SAKPPTNPQA LLLRKEHVFG ARVFTTKARF GGKNREISID
201: CRVDEDAKLC FSVDSKQVLQ IKRLRWKFRG NEKVEIDGVH VQISWDVYNW LFQSKSSGDG GGGGGHAVFM FRFESDPEAE EVCETKRKEE EDEKNRNGIV
301: LWKPKKQCGN SFGIKGIVEW RKMRKRFVKS KRSSSSSSIS MSSASSACSS SVMEWASSAD EAEYGGGGCS GSGSGNGLGF SLLVYAWIK

Arabidopsis Description

AT5g11000/T30N20_270 [Source:UniProtKB/TrEMBL;Acc:Q9LEU1]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.