Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d020470_P001 | Maize | plastid | 83.85 | 83.85 |
| KXG35635 | Sorghum | plastid | 84.32 | 79.6 |
| TraesCS5A01G226100.1 | Wheat | plastid | 70.07 | 71.26 |
| TraesCS5D01G233300.1 | Wheat | plastid | 69.6 | 70.77 |
| TraesCS5B01G224600.1 | Wheat | plastid | 69.6 | 70.77 |
| Os09t0416600-02 | Rice | plastid | 71.97 | 68.24 |
| HORVU5Hr1G065520.1 | Barley | plastid | 70.07 | 65.27 |
| Zm00001d050436_P001 | Maize | plastid | 61.52 | 63.48 |
| Zm00001d032164_P001 | Maize | plastid | 58.91 | 61.39 |
| GSMUA_Achr9P13220_001 | Banana | mitochondrion, peroxisome, plastid | 46.56 | 51.58 |
| GSMUA_Achr5P22830_001 | Banana | cytosol, nucleus, peroxisome | 46.32 | 50.13 |
| GSMUA_Achr3P04550_001 | Banana | plastid | 31.35 | 49.62 |
| GSMUA_Achr10P... | Banana | cytosol, golgi, plastid | 44.42 | 45.95 |
| Zm00001d045119_P001 | Maize | plastid | 35.63 | 42.73 |
| PGSC0003DMT400068894 | Potato | plastid | 32.78 | 39.54 |
| Solyc08g028780.1.1 | Tomato | mitochondrion | 30.88 | 38.35 |
| KRH52365 | Soybean | plastid | 29.93 | 37.84 |
| VIT_04s0008g05970.t01 | Wine grape | plastid | 32.54 | 36.93 |
| CDY51100 | Canola | cytosol | 29.45 | 36.47 |
| KRH61697 | Soybean | plastid | 26.6 | 36.01 |
| CDX69793 | Canola | nucleus | 31.83 | 35.64 |
| CDX85733 | Canola | cytosol, nucleus, plastid | 28.98 | 35.57 |
| KRH15788 | Soybean | plastid | 28.74 | 35.38 |
| Bra008998.1-P | Field mustard | nucleus, peroxisome, plastid | 32.3 | 35.05 |
| KRH05263 | Soybean | mitochondrion, plastid | 28.27 | 35.0 |
| Bra028555.1-P | Field mustard | nucleus | 28.5 | 34.99 |
| CDX97072 | Canola | nucleus | 32.07 | 34.88 |
| AT5G11000.1 | Thale cress | cytosol, plastid | 31.12 | 33.68 |
| Zm00001d015796_P001 | Maize | cytosol | 15.2 | 33.33 |
| CDY56275 | Canola | cytosol | 11.64 | 32.03 |
| Zm00001d034527_P001 | Maize | plastid | 21.62 | 30.95 |
| Zm00001d013042_P001 | Maize | plastid | 21.38 | 30.93 |
| Zm00001d053654_P001 | Maize | plastid | 21.62 | 30.74 |
| CDX76763 | Canola | plastid | 24.7 | 29.8 |
| Bra007811.1-P | Field mustard | plastid | 24.23 | 29.14 |
| Zm00001d035694_P001 | Maize | cytosol | 20.9 | 28.95 |
| Zm00001d042425_P001 | Maize | plastid | 21.38 | 28.94 |
| AT2G25200.1 | Thale cress | plastid | 24.23 | 28.81 |
| Zm00001d004919_P001 | Maize | plastid | 20.9 | 27.24 |
| Zm00001d003829_P001 | Maize | cytosol, nucleus, peroxisome | 22.09 | 27.03 |
| Zm00001d052520_P001 | Maize | plastid | 20.43 | 26.96 |
| Zm00001d031962_P001 | Maize | plastid | 19.71 | 26.27 |
| Zm00001d025337_P001 | Maize | cytosol | 21.38 | 26.09 |
| Zm00001d021869_P001 | Maize | plastid | 17.58 | 26.06 |
| Zm00001d037575_P001 | Maize | cytosol | 14.49 | 25.31 |
Protein Annotations
| EnsemblPlants:Zm00001d005752_P001 | EnsemblPlants:Zm00001d005752_T001 | EnsemblPlantsGene:Zm00001d005752 | EntrezGene:103647426 | InterPro:DUF868_pln | PANTHER:PTHR31972 |
| PANTHER:PTHR31972:SF14 | PFAM:PF05910 | ProteinID:ONM21801.1 | SEG:seg | UniParc:UPI000221764B | UniProt:A0A1D6EPV4 |
| MapMan:35.2 | : | : | : | : | : |
Description
DUF868 family protein
Coordinates
chr2:-:186198238..186199503
Molecular Weight (calculated)
44714.2 Da
IEP (calculated)
10.332
GRAVY (calculated)
-0.463
Length
421 amino acids
Sequence
(BLAST)
(BLAST)
001: MPDAIPACFR RVAAAPGGRA SPGSGPGSGV GTSLATSVYT TRLGLAALTW SRAALGLSLR AVLRVSAGPA PSPSASDYGD GEVEYGGAEK GDGEGEQDAT
101: VAVRLRPWLL WRRRGSKRFR ARGRRVDLAW DLSRARFAAS GSPEPVSGYF VAVVVDGEMA VAAGDMAEEA YRKTRARRPP GPGSGPGPAL VSRREHVSMR
201: DGAGGGHRTC VVVRGREREI AVDLVSRAQG QGQGRERDRA EVGMSVSVDG DRVLHVRRLR WKFRGTEKLD LGAGDRVLVS WDLHDWLFPA RDASPPAATA
301: PPAHAVFVFR FELAGRDGEE RDPADAREKE VLQVGGGLAG YVDGRRWGRG DWSESSSSGE KRRTRGQASR LAKASSSSSA SVASSSASWA SGSTVMDWGS
401: PEEAELQSGD GFSLLVYAWK N
101: VAVRLRPWLL WRRRGSKRFR ARGRRVDLAW DLSRARFAAS GSPEPVSGYF VAVVVDGEMA VAAGDMAEEA YRKTRARRPP GPGSGPGPAL VSRREHVSMR
201: DGAGGGHRTC VVVRGREREI AVDLVSRAQG QGQGRERDRA EVGMSVSVDG DRVLHVRRLR WKFRGTEKLD LGAGDRVLVS WDLHDWLFPA RDASPPAATA
301: PPAHAVFVFR FELAGRDGEE RDPADAREKE VLQVGGGLAG YVDGRRWGRG DWSESSSSGE KRRTRGQASR LAKASSSSSA SVASSSASWA SGSTVMDWGS
401: PEEAELQSGD GFSLLVYAWK N
001: MSPSWLRPTA DHNHPPPQPP SQSPSPLSSG DPNLTTCLYQ TDHGVFYLTW SRTFLGGHSV NLFLHSQDYY NHSSPLSFSS ADLSLSSAVS FHLNLNTLAF
101: WKKRGSRFVS PKIQVFWDLS KAKFDSGSEP RSGFYIAVVV DGEMGLLVGD SVKEAYARAK SAKPPTNPQA LLLRKEHVFG ARVFTTKARF GGKNREISID
201: CRVDEDAKLC FSVDSKQVLQ IKRLRWKFRG NEKVEIDGVH VQISWDVYNW LFQSKSSGDG GGGGGHAVFM FRFESDPEAE EVCETKRKEE EDEKNRNGIV
301: LWKPKKQCGN SFGIKGIVEW RKMRKRFVKS KRSSSSSSIS MSSASSACSS SVMEWASSAD EAEYGGGGCS GSGSGNGLGF SLLVYAWIK
101: WKKRGSRFVS PKIQVFWDLS KAKFDSGSEP RSGFYIAVVV DGEMGLLVGD SVKEAYARAK SAKPPTNPQA LLLRKEHVFG ARVFTTKARF GGKNREISID
201: CRVDEDAKLC FSVDSKQVLQ IKRLRWKFRG NEKVEIDGVH VQISWDVYNW LFQSKSSGDG GGGGGHAVFM FRFESDPEAE EVCETKRKEE EDEKNRNGIV
301: LWKPKKQCGN SFGIKGIVEW RKMRKRFVKS KRSSSSSSIS MSSASSACSS SVMEWASSAD EAEYGGGGCS GSGSGNGLGF SLLVYAWIK
Arabidopsis Description
AT5g11000/T30N20_270 [Source:UniProtKB/TrEMBL;Acc:Q9LEU1]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.