Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G226100.1 | Wheat | plastid | 98.79 | 98.79 |
| TraesCS5B01G224600.1 | Wheat | plastid | 98.31 | 98.31 |
| HORVU5Hr1G065520.1 | Barley | plastid | 97.34 | 89.16 |
| Os09t0416600-02 | Rice | plastid | 78.02 | 72.75 |
| Zm00001d020470_P001 | Maize | plastid | 73.91 | 72.68 |
| Zm00001d005752_P001 | Maize | plastid | 70.77 | 69.6 |
| KXG35635 | Sorghum | plastid | 73.91 | 68.61 |
| GSMUA_Achr3P04550_001 | Banana | plastid | 34.3 | 53.38 |
| GSMUA_Achr9P13220_001 | Banana | mitochondrion, peroxisome, plastid | 48.55 | 52.89 |
| GSMUA_Achr5P22830_001 | Banana | cytosol, nucleus, peroxisome | 44.69 | 47.56 |
| GSMUA_Achr10P... | Banana | cytosol, golgi, plastid | 45.65 | 46.44 |
| PGSC0003DMT400068894 | Potato | plastid | 34.06 | 40.4 |
| VIT_04s0008g05970.t01 | Wine grape | plastid | 35.75 | 39.89 |
| Solyc08g028780.1.1 | Tomato | mitochondrion | 32.37 | 39.53 |
| KRH52365 | Soybean | plastid | 31.4 | 39.04 |
| CDY51100 | Canola | cytosol | 30.68 | 37.35 |
| CDX69793 | Canola | nucleus | 33.82 | 37.23 |
| Bra008998.1-P | Field mustard | nucleus, peroxisome, plastid | 34.78 | 37.11 |
| CDX97072 | Canola | nucleus | 34.54 | 36.95 |
| CDX85733 | Canola | cytosol, nucleus, plastid | 30.43 | 36.73 |
| KRH61697 | Soybean | plastid | 27.05 | 36.01 |
| Bra028555.1-P | Field mustard | nucleus | 29.71 | 35.86 |
| AT5G11000.1 | Thale cress | cytosol, plastid | 33.09 | 35.22 |
| CDY56275 | Canola | cytosol | 12.8 | 34.64 |
| KRH15788 | Soybean | plastid | 28.5 | 34.5 |
| KRH05263 | Soybean | mitochondrion, plastid | 28.26 | 34.41 |
| TraesCS7D01G147500.1 | Wheat | plastid | 32.37 | 34.1 |
| CDX76763 | Canola | plastid | 27.29 | 32.38 |
| Bra007811.1-P | Field mustard | plastid | 26.81 | 31.71 |
| AT2G25200.1 | Thale cress | plastid | 27.05 | 31.64 |
| TraesCS2D01G204300.1 | Wheat | plastid | 20.77 | 30.39 |
| TraesCS6D01G150500.1 | Wheat | nucleus | 22.22 | 29.39 |
| TraesCS1D01G026300.1 | Wheat | cytosol | 21.01 | 28.62 |
| TraesCS5D01G467300.1 | Wheat | cytosol, plastid | 21.01 | 28.25 |
| TraesCS5D01G137700.1 | Wheat | plastid | 21.74 | 28.04 |
| TraesCS7D01G277700.1 | Wheat | plastid | 19.32 | 26.49 |
| TraesCS3D01G411600.1 | Wheat | plastid | 20.53 | 26.23 |
| TraesCS2D01G290200.1 | Wheat | cytosol | 20.77 | 25.9 |
| TraesCS4D01G129600.1 | Wheat | plastid | 18.84 | 24.53 |
| TraesCS4D01G010300.1 | Wheat | cytosol | 17.63 | 20.8 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G233300.1 | EnsemblPlantsGene:TraesCS5D01G233300 | InterPro:DUF868_pln | PANTHER:PTHR31972 | PANTHER:PTHR31972:SF14 | PFAM:PF05910 |
| SEG:seg | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr5D:-:340969353..340970597
Molecular Weight (calculated)
44953.6 Da
IEP (calculated)
10.042
GRAVY (calculated)
-0.487
Length
414 amino acids
Sequence
(BLAST)
(BLAST)
001: MPNAIPAFFR ASPAAASGSG AGAGPSLATS VYETRLGLAA LSWSRAAFGL SLRAVLRVGA LASSSSASDY GCYDDGPEFD EETTIAVRVR PWLFWRRRGT
101: KRFHVHDRRI DLAWDLTRAR FASPGSPEPS SGYFVAVVVD GEMAVVAGDM AEEAYRKTKA QRPTGPGHVL VSRREHVSMR DGGHGRGHKT CVKVRGKERE
201: ISLDLVSRGH GKDREMDKEK DKAEVGLSVS VDGERVLHIR RLRWKFRGSE KVDFGGGDRV QVSWDLHNWL FSAREPALTD AASVLAAASP PAHAVFVFRF
301: ELGDTGGGEE RDTAEAKEKE LLDKARRGGA GVLSGYLGRW GRGDWSETSS NGENRRKRGQ ARRLAKASSS SSASIASSSA SWASSSTVMD WASPEEAELH
401: RGDGFSLLVY AWKS
101: KRFHVHDRRI DLAWDLTRAR FASPGSPEPS SGYFVAVVVD GEMAVVAGDM AEEAYRKTKA QRPTGPGHVL VSRREHVSMR DGGHGRGHKT CVKVRGKERE
201: ISLDLVSRGH GKDREMDKEK DKAEVGLSVS VDGERVLHIR RLRWKFRGSE KVDFGGGDRV QVSWDLHNWL FSAREPALTD AASVLAAASP PAHAVFVFRF
301: ELGDTGGGEE RDTAEAKEKE LLDKARRGGA GVLSGYLGRW GRGDWSETSS NGENRRKRGQ ARRLAKASSS SSASIASSSA SWASSSTVMD WASPEEAELH
401: RGDGFSLLVY AWKS
001: MSPSWLRPTA DHNHPPPQPP SQSPSPLSSG DPNLTTCLYQ TDHGVFYLTW SRTFLGGHSV NLFLHSQDYY NHSSPLSFSS ADLSLSSAVS FHLNLNTLAF
101: WKKRGSRFVS PKIQVFWDLS KAKFDSGSEP RSGFYIAVVV DGEMGLLVGD SVKEAYARAK SAKPPTNPQA LLLRKEHVFG ARVFTTKARF GGKNREISID
201: CRVDEDAKLC FSVDSKQVLQ IKRLRWKFRG NEKVEIDGVH VQISWDVYNW LFQSKSSGDG GGGGGHAVFM FRFESDPEAE EVCETKRKEE EDEKNRNGIV
301: LWKPKKQCGN SFGIKGIVEW RKMRKRFVKS KRSSSSSSIS MSSASSACSS SVMEWASSAD EAEYGGGGCS GSGSGNGLGF SLLVYAWIK
101: WKKRGSRFVS PKIQVFWDLS KAKFDSGSEP RSGFYIAVVV DGEMGLLVGD SVKEAYARAK SAKPPTNPQA LLLRKEHVFG ARVFTTKARF GGKNREISID
201: CRVDEDAKLC FSVDSKQVLQ IKRLRWKFRG NEKVEIDGVH VQISWDVYNW LFQSKSSGDG GGGGGHAVFM FRFESDPEAE EVCETKRKEE EDEKNRNGIV
301: LWKPKKQCGN SFGIKGIVEW RKMRKRFVKS KRSSSSSSIS MSSASSACSS SVMEWASSAD EAEYGGGGCS GSGSGNGLGF SLLVYAWIK
Arabidopsis Description
AT5g11000/T30N20_270 [Source:UniProtKB/TrEMBL;Acc:Q9LEU1]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.