Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d005752_P001 | Maize | plastid | 83.85 | 83.85 |
| KXG35635 | Sorghum | plastid | 87.41 | 82.51 |
| TraesCS5A01G226100.1 | Wheat | plastid | 73.16 | 74.4 |
| TraesCS5D01G233300.1 | Wheat | plastid | 72.68 | 73.91 |
| TraesCS5B01G224600.1 | Wheat | plastid | 72.68 | 73.91 |
| Os09t0416600-02 | Rice | plastid | 73.87 | 70.05 |
| HORVU5Hr1G065520.1 | Barley | plastid | 72.92 | 67.92 |
| Zm00001d050436_P001 | Maize | plastid | 64.85 | 66.91 |
| Zm00001d032164_P001 | Maize | plastid | 62.71 | 65.35 |
| GSMUA_Achr3P04550_001 | Banana | plastid | 33.02 | 52.26 |
| GSMUA_Achr9P13220_001 | Banana | mitochondrion, peroxisome, plastid | 47.03 | 52.11 |
| GSMUA_Achr5P22830_001 | Banana | cytosol, nucleus, peroxisome | 46.79 | 50.64 |
| GSMUA_Achr10P... | Banana | cytosol, golgi, plastid | 46.32 | 47.91 |
| Zm00001d045119_P001 | Maize | plastid | 36.1 | 43.3 |
| PGSC0003DMT400068894 | Potato | plastid | 33.25 | 40.11 |
| KRH52365 | Soybean | plastid | 31.35 | 39.64 |
| Solyc08g028780.1.1 | Tomato | mitochondrion | 31.35 | 38.94 |
| VIT_04s0008g05970.t01 | Wine grape | plastid | 33.97 | 38.54 |
| KRH61697 | Soybean | plastid | 27.79 | 37.62 |
| CDY51100 | Canola | cytosol | 29.45 | 36.47 |
| KRH15788 | Soybean | plastid | 29.45 | 36.26 |
| CDX69793 | Canola | nucleus | 31.83 | 35.64 |
| CDX85733 | Canola | cytosol, nucleus, plastid | 28.98 | 35.57 |
| CDX97072 | Canola | nucleus | 32.3 | 35.14 |
| Bra008998.1-P | Field mustard | nucleus, peroxisome, plastid | 32.3 | 35.05 |
| KRH05263 | Soybean | mitochondrion, plastid | 28.27 | 35.0 |
| Bra028555.1-P | Field mustard | nucleus | 28.5 | 34.99 |
| AT5G11000.1 | Thale cress | cytosol, plastid | 31.35 | 33.93 |
| Zm00001d015796_P001 | Maize | cytosol | 14.96 | 32.81 |
| CDY56275 | Canola | cytosol | 11.4 | 31.37 |
| Zm00001d013042_P001 | Maize | plastid | 21.38 | 30.93 |
| CDX76763 | Canola | plastid | 25.42 | 30.66 |
| Zm00001d034527_P001 | Maize | plastid | 21.38 | 30.61 |
| AT2G25200.1 | Thale cress | plastid | 25.65 | 30.51 |
| Zm00001d053654_P001 | Maize | plastid | 21.14 | 30.07 |
| Bra007811.1-P | Field mustard | plastid | 24.94 | 30.0 |
| Zm00001d035694_P001 | Maize | cytosol | 21.62 | 29.93 |
| Zm00001d042425_P001 | Maize | plastid | 21.38 | 28.94 |
| Zm00001d004919_P001 | Maize | plastid | 21.14 | 27.55 |
| Zm00001d021869_P001 | Maize | plastid | 18.53 | 27.46 |
| Zm00001d003829_P001 | Maize | cytosol, nucleus, peroxisome | 22.33 | 27.33 |
| Zm00001d052520_P001 | Maize | plastid | 20.43 | 26.96 |
| Zm00001d025337_P001 | Maize | cytosol | 21.62 | 26.38 |
| Zm00001d037575_P001 | Maize | cytosol | 14.96 | 26.14 |
| Zm00001d031962_P001 | Maize | plastid | 19.48 | 25.95 |
Protein Annotations
| EnsemblPlants:Zm00001d020470_P001 | EnsemblPlants:Zm00001d020470_T001 | EnsemblPlantsGene:Zm00001d020470 | InterPro:DUF868_pln | PANTHER:PTHR31972 | PANTHER:PTHR31972:SF14 |
| PFAM:PF05910 | ProteinID:ONM54970.1 | SEG:seg | UniParc:UPI0008440F15 | UniProt:A0A1D6I4A3 | MapMan:35.2 |
Description
DUF868 family protein
Coordinates
chr7:-:116925169..116926434
Molecular Weight (calculated)
44850.1 Da
IEP (calculated)
9.107
GRAVY (calculated)
-0.476
Length
421 amino acids
Sequence
(BLAST)
(BLAST)
001: MPDAIPACFR AAAAPSGRAS PAPSGSGSGS GAGTSLATSV YDTRLGLATL SWSRAPLGLS LRAVLRVSAG PAPAPSPSAS DYGDGEVEYD DEEEEATVAV
101: RVRPWLLWRR RGSKRFRVRD RRVDLAWDLS RARFPPSGSP EPSSGYFVAV VVDGEMAVVA GDMADEAYRK TRARRPAGPG PVLVSRREHV SMRDGAGGGG
201: RCHRTCVVVR GREREISVDL VSRAQGQGRE RDRAEVGMSV SVDGDRVLHV RRLRWKFRGT ERVDLGGGDR VLVSWDLHNW LFPARDASPP DAAAAAPVPP
301: AHAIFVFRFE LADAGEERDP ADAKEEELLD KAGTGGGGWP GYVSGWGRGD WSESSSNGGE KRRKRGQASR LAKASSSSSA SVASSSASWA SGSTVMDWGS
401: AEEAQLQSGD GFSLLVYAWK N
101: RVRPWLLWRR RGSKRFRVRD RRVDLAWDLS RARFPPSGSP EPSSGYFVAV VVDGEMAVVA GDMADEAYRK TRARRPAGPG PVLVSRREHV SMRDGAGGGG
201: RCHRTCVVVR GREREISVDL VSRAQGQGRE RDRAEVGMSV SVDGDRVLHV RRLRWKFRGT ERVDLGGGDR VLVSWDLHNW LFPARDASPP DAAAAAPVPP
301: AHAIFVFRFE LADAGEERDP ADAKEEELLD KAGTGGGGWP GYVSGWGRGD WSESSSNGGE KRRKRGQASR LAKASSSSSA SVASSSASWA SGSTVMDWGS
401: AEEAQLQSGD GFSLLVYAWK N
001: MSPSWLRPTA DHNHPPPQPP SQSPSPLSSG DPNLTTCLYQ TDHGVFYLTW SRTFLGGHSV NLFLHSQDYY NHSSPLSFSS ADLSLSSAVS FHLNLNTLAF
101: WKKRGSRFVS PKIQVFWDLS KAKFDSGSEP RSGFYIAVVV DGEMGLLVGD SVKEAYARAK SAKPPTNPQA LLLRKEHVFG ARVFTTKARF GGKNREISID
201: CRVDEDAKLC FSVDSKQVLQ IKRLRWKFRG NEKVEIDGVH VQISWDVYNW LFQSKSSGDG GGGGGHAVFM FRFESDPEAE EVCETKRKEE EDEKNRNGIV
301: LWKPKKQCGN SFGIKGIVEW RKMRKRFVKS KRSSSSSSIS MSSASSACSS SVMEWASSAD EAEYGGGGCS GSGSGNGLGF SLLVYAWIK
101: WKKRGSRFVS PKIQVFWDLS KAKFDSGSEP RSGFYIAVVV DGEMGLLVGD SVKEAYARAK SAKPPTNPQA LLLRKEHVFG ARVFTTKARF GGKNREISID
201: CRVDEDAKLC FSVDSKQVLQ IKRLRWKFRG NEKVEIDGVH VQISWDVYNW LFQSKSSGDG GGGGGHAVFM FRFESDPEAE EVCETKRKEE EDEKNRNGIV
301: LWKPKKQCGN SFGIKGIVEW RKMRKRFVKS KRSSSSSSIS MSSASSACSS SVMEWASSAD EAEYGGGGCS GSGSGNGLGF SLLVYAWIK
Arabidopsis Description
AT5g11000/T30N20_270 [Source:UniProtKB/TrEMBL;Acc:Q9LEU1]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.