Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY56275 | Canola | cytosol | 33.62 | 77.78 |
| CDX76763 | Canola | plastid | 74.86 | 75.93 |
| Bra007811.1-P | Field mustard | plastid | 74.58 | 75.43 |
| VIT_04s0008g05970.t01 | Wine grape | plastid | 43.22 | 41.24 |
| AT5G11000.1 | Thale cress | cytosol, plastid | 42.09 | 38.3 |
| AT5G28150.1 | Thale cress | cytosol, plastid | 24.58 | 30.1 |
| GSMUA_Achr9P13220_001 | Banana | mitochondrion, peroxisome, plastid | 30.79 | 28.68 |
| AT3G04860.1 | Thale cress | plastid | 23.16 | 28.37 |
| Zm00001d032164_P001 | Maize | plastid | 31.64 | 27.72 |
| Zm00001d050436_P001 | Maize | plastid | 31.92 | 27.7 |
| TraesCS5A01G226100.1 | Wheat | plastid | 31.92 | 27.29 |
| TraesCS5B01G224600.1 | Wheat | plastid | 31.64 | 27.05 |
| TraesCS5D01G233300.1 | Wheat | plastid | 31.64 | 27.05 |
| EES13906 | Sorghum | plastid | 31.36 | 26.55 |
| Os08t0439600-00 | Rice | plastid | 30.23 | 26.35 |
| GSMUA_Achr3P04550_001 | Banana | plastid | 19.77 | 26.32 |
| AT4G12690.2 | Thale cress | nucleus | 21.19 | 26.32 |
| Zm00001d020470_P001 | Maize | plastid | 30.51 | 25.65 |
| GSMUA_Achr5P22830_001 | Banana | cytosol, nucleus, peroxisome | 27.97 | 25.45 |
| TraesCS7A01G146000.1 | Wheat | plastid | 24.29 | 25.22 |
| AT2G04220.1 | Thale cress | cytosol | 21.75 | 25.08 |
| AT2G27770.1 | Thale cress | plastid | 22.6 | 25.0 |
| HORVU5Hr1G065520.1 | Barley | plastid | 31.92 | 25.0 |
| Os09t0416600-02 | Rice | plastid | 30.79 | 24.55 |
| Os06t0181800-00 | Rice | plastid | 24.29 | 24.5 |
| KXG35635 | Sorghum | plastid | 30.79 | 24.44 |
| Zm00001d005752_P001 | Maize | plastid | 28.81 | 24.23 |
| AT5G48270.1 | Thale cress | plastid | 22.03 | 24.22 |
| EER87970 | Sorghum | plastid | 24.29 | 23.96 |
| Zm00001d045119_P001 | Maize | plastid | 23.73 | 23.93 |
| GSMUA_Achr10P... | Banana | cytosol, golgi, plastid | 27.4 | 23.83 |
| AT3G13229.1 | Thale cress | cytosol | 19.21 | 23.53 |
| AT2G36470.1 | Thale cress | nucleus | 21.19 | 22.94 |
| TraesCS7B01G048400.1 | Wheat | plastid | 24.86 | 22.39 |
| TraesCS7D01G147500.1 | Wheat | plastid | 24.86 | 22.39 |
| HORVU7Hr1G029920.1 | Barley | mitochondrion | 25.14 | 22.36 |
| Os02t0695050-00 | Rice | extracellular, golgi, mitochondrion | 11.58 | 15.77 |
| Zm00001d037575_P001 | Maize | cytosol | 10.17 | 14.94 |
Protein Annotations
| MapMan:35.2 | EntrezGene:817058 | ProteinID:AAD23671.1 | ProteinID:AEC07670.1 | EMBL:AK175318 | ArrayExpress:AT2G25200 |
| EnsemblPlantsGene:AT2G25200 | RefSeq:AT2G25200 | TAIR:AT2G25200 | RefSeq:AT2G25200-TAIR-G | EnsemblPlants:AT2G25200.1 | TAIR:AT2G25200.1 |
| EMBL:BT011748 | InterPro:DUF868_pln | GO:GO:0008150 | RefSeq:NP_850061.1 | PFAM:PF05910 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PANTHER:PTHR31972 | PANTHER:PTHR31972:SF3 | UniProt:Q9SIS2 |
| UniParc:UPI00000A348A | SEG:seg | : | : | : | : |
Description
At2g25200 [Source:UniProtKB/TrEMBL;Acc:Q9SIS2]
Coordinates
chr2:-:10736261..10737800
Molecular Weight (calculated)
40353.3 Da
IEP (calculated)
10.132
GRAVY (calculated)
-0.327
Length
354 amino acids
Sequence
(BLAST)
(BLAST)
001: MKISALGRGG SSPLSACFHP SATAINDDLP SALPSPSNPS YISTSGDATT TCQYHTNVGV FFLSWSRSFL RRSLHLHFYS CNSTNCYLHS LDCYRHSIPF
101: AFRLEIKPLT FWRKNGSKKL SRKPDIRVVW DLTHAKFGSG PDPESGFYVA VFVSGEVGLL VGGGNLKQRP RRQILVSKKE NLFGNRVYST KIMIQGKLRE
201: ISIDVKVVND DASLRFSVDD KSVLKISQLQ WKFRGNTKIV IDGVTIQISW DVFNWLFGGK DKVKPDKIPA VFLLRFENQE VEGNDVLMMN KRVRDDVILR
301: KENCRTPSFW ASTYSHWSSS RMSSVMEWSS CREEDERSFG SKSWFSLIIY AWRK
101: AFRLEIKPLT FWRKNGSKKL SRKPDIRVVW DLTHAKFGSG PDPESGFYVA VFVSGEVGLL VGGGNLKQRP RRQILVSKKE NLFGNRVYST KIMIQGKLRE
201: ISIDVKVVND DASLRFSVDD KSVLKISQLQ WKFRGNTKIV IDGVTIQISW DVFNWLFGGK DKVKPDKIPA VFLLRFENQE VEGNDVLMMN KRVRDDVILR
301: KENCRTPSFW ASTYSHWSSS RMSSVMEWSS CREEDERSFG SKSWFSLIIY AWRK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.