CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH15788	Soybean	plastid	88.53	88.01
KRH52365	Soybean	plastid	53.53	54.65
KRH61697	Soybean	plastid	48.24	52.73
CDX85733	Canola	cytosol, nucleus, plastid	44.41	44.02
PGSC0003DMT400068894	Potato	plastid	44.71	43.55
CDY51100	Canola	cytosol	43.53	43.53
Bra028555.1-P	Field mustard	nucleus	43.24	42.86
Solyc08g028780.1.1	Tomato	mitochondrion	42.06	42.18
CDX69793	Canola	nucleus	42.94	38.83
AT5G11000.1	Thale cress	cytosol, plastid	44.41	38.82
CDX97072	Canola	nucleus	43.82	38.5
Bra008998.1-P	Field mustard	nucleus, peroxisome, plastid	43.82	38.4
KRG96948	Soybean	plastid	30.29	33.01
GSMUA_Achr3P04550_001	Banana	plastid	24.71	31.58
KRH68709	Soybean	plastid	28.24	31.48
Os06t0181800-00	Rice	plastid	32.35	31.34
KRG92651	Soybean	cytosol	27.65	31.33
GSMUA_Achr5P22830_001	Banana	cytosol, nucleus, peroxisome	35.59	31.11
GSMUA_Achr9P13220_001	Banana	mitochondrion, peroxisome, plastid	34.71	31.05
KRH68710	Soybean	plastid	27.06	30.98
KRH34070	Soybean	cytosol, endoplasmic reticulum, nucleus	27.35	30.9
KRG92733	Soybean	plastid	30.0	30.82
GSMUA_Achr10P...	Banana	cytosol, golgi, plastid	36.76	30.71
KRH32026	Soybean	cytosol, plastid	27.06	30.67
KRG95548	Soybean	cytosol	27.06	30.56
Zm00001d050436_P001	Maize	plastid	36.47	30.39
Zm00001d045119_P001	Maize	plastid	31.18	30.2
Zm00001d032164_P001	Maize	plastid	35.29	29.7
KRH71412	Soybean	cytosol	26.18	29.57
EER87970	Sorghum	plastid	31.18	29.53
KRG96949	Soybean	cytosol, plastid	26.47	29.41
TraesCS7A01G146000.1	Wheat	plastid	29.12	29.03
EES13906	Sorghum	plastid	35.59	28.95
KRH34068	Soybean	plastid	27.94	28.7
TraesCS5A01G226100.1	Wheat	plastid	34.71	28.5
Zm00001d020470_P001	Maize	plastid	35.0	28.27
Zm00001d005752_P001	Maize	plastid	35.0	28.27
TraesCS5D01G233300.1	Wheat	plastid	34.41	28.26
TraesCS5B01G224600.1	Wheat	plastid	34.41	28.26
KRH67230	Soybean	cytosol	25.88	28.11
Os08t0439600-00	Rice	plastid	32.94	27.59
KRH16994	Soybean	cytosol	24.12	26.89
KRH54304	Soybean	cytosol	25.59	26.69
KRH63641	Soybean	cytosol	25.59	26.69
KXG35635	Sorghum	plastid	35.0	26.68
Os09t0416600-02	Rice	plastid	34.71	26.58
KRH72631	Soybean	cytosol	23.82	26.38
KRH57148	Soybean	cytosol	25.29	26.38
HORVU5Hr1G065520.1	Barley	plastid	35.0	26.33
KRH26585	Soybean	plastid	23.24	26.25
KRH22720	Soybean	plastid	23.24	26.16
KRG90008	Soybean	plastid	23.82	25.71
TraesCS7B01G048400.1	Wheat	plastid	29.12	25.19
TraesCS7D01G147500.1	Wheat	plastid	29.12	25.19
KRH67854	Soybean	cytosol	22.65	25.0
KRH14191	Soybean	cytosol	22.65	24.76
HORVU7Hr1G029920.1	Barley	mitochondrion	28.53	24.37
KRH25175	Soybean	cytosol	22.35	23.97
KRG96144	Soybean	nucleus	21.47	23.78
KRH30504	Soybean	plastid	22.35	23.38
KRH03859	Soybean	cytosol	18.24	23.13
Zm00001d037575_P001	Maize	cytosol	14.12	19.92
Os02t0695050-00	Rice	extracellular, golgi, mitochondrion	12.65	16.54

Protein Annotations

EMBL:ACUP02010720	EnsemblPlants:KRH05263	EnsemblPlantsGene:GLYMA_17G216500	EntrezGene:100819926	InterPro:DUF868_pln	PANTHER:PTHR31972
PANTHER:PTHR31972:SF3	PFAM:PF05910	ProteinID:KRH05263	ProteinID:KRH05263.1	SEG:seg	UniParc:UPI000233E09C
UniProt:I1MWX9	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr17:+:36492621..36494615

Molecular Weight (calculated)

38534.1 Da

IEP (calculated)

9.241

GRAVY (calculated)

-0.583

Length

340 amino acids

Sequence
(BLAST)

001: MFFLSSPFSS CFRASQRTNH DPTNLTTYIY HTEYGTVSLT WSRSLLGRSL HVNLHNRSSF HLLLKPWKKN GSKKLSHNTV FLWNLSNARF ESGLEPRSRF
101: YLAIEVEHGL SLLIGDLSPR SSKAKKPSKT NQLLVLKRDN VHVAPHRSRV YQTKAKLGGK VREIEIDCDV YNCGGYGYEN ENSSRLLFSV DGEKVLEVAR
201: LKWKFRGSER VEIDGVHVQI SWDVHDWLFE KDKDIVNHRS SNNNNSNNNG IEGHAVFMFK FEEDEVRGSG GGKEEEQQWS MGSGGEWRNG KSWSSSSLSV
301: SSTSGGSFGG SSSVMEWSSV EENELVVPLG FSLVVYAWRR

Best Arabidopsis Sequence Match ( AT5G11000.1 )
(BLAST)

001: MSPSWLRPTA DHNHPPPQPP SQSPSPLSSG DPNLTTCLYQ TDHGVFYLTW SRTFLGGHSV NLFLHSQDYY NHSSPLSFSS ADLSLSSAVS FHLNLNTLAF
101: WKKRGSRFVS PKIQVFWDLS KAKFDSGSEP RSGFYIAVVV DGEMGLLVGD SVKEAYARAK SAKPPTNPQA LLLRKEHVFG ARVFTTKARF GGKNREISID
201: CRVDEDAKLC FSVDSKQVLQ IKRLRWKFRG NEKVEIDGVH VQISWDVYNW LFQSKSSGDG GGGGGHAVFM FRFESDPEAE EVCETKRKEE EDEKNRNGIV
301: LWKPKKQCGN SFGIKGIVEW RKMRKRFVKS KRSSSSSSIS MSSASSACSS SVMEWASSAD EAEYGGGGCS GSGSGNGLGF SLLVYAWIK

Arabidopsis Description

AT5g11000/T30N20_270 [Source:UniProtKB/TrEMBL;Acc:Q9LEU1]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.