Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX85733 | Canola | cytosol, nucleus, plastid | 95.0 | 94.17 |
| CDX97072 | Canola | nucleus | 82.06 | 72.09 |
| AT5G11000.1 | Thale cress | cytosol, plastid | 81.47 | 71.21 |
| CDX69793 | Canola | nucleus | 78.53 | 71.01 |
| PGSC0003DMT400068894 | Potato | plastid | 47.65 | 46.42 |
| Solyc08g028780.1.1 | Tomato | mitochondrion | 46.18 | 46.31 |
| KRH52365 | Soybean | plastid | 43.53 | 44.44 |
| CDY56275 | Canola | cytosol | 20.0 | 44.44 |
| KRH15788 | Soybean | plastid | 43.82 | 43.57 |
| KRH05263 | Soybean | mitochondrion, plastid | 43.53 | 43.53 |
| KRH61697 | Soybean | plastid | 39.41 | 43.09 |
| CDX76763 | Canola | plastid | 42.06 | 40.97 |
| GSMUA_Achr9P13220_001 | Banana | mitochondrion, peroxisome, plastid | 37.06 | 33.16 |
| GSMUA_Achr3P04550_001 | Banana | plastid | 25.59 | 32.71 |
| CDY72112 | Canola | cytosol, peroxisome, plastid | 27.06 | 32.62 |
| Zm00001d032164_P001 | Maize | plastid | 37.94 | 31.93 |
| Zm00001d050436_P001 | Maize | plastid | 38.24 | 31.86 |
| CDY21108 | Canola | plastid | 26.18 | 31.56 |
| CDY50761 | Canola | cytosol, peroxisome, plastid | 26.47 | 31.36 |
| CDX86191 | Canola | plastid | 26.76 | 31.06 |
| TraesCS5A01G226100.1 | Wheat | plastid | 37.65 | 30.92 |
| CDY30020 | Canola | cytosol, plastid | 25.59 | 30.85 |
| CDY52485 | Canola | plastid | 26.47 | 30.72 |
| GSMUA_Achr10P... | Banana | cytosol, golgi, plastid | 36.76 | 30.71 |
| TraesCS5B01G224600.1 | Wheat | plastid | 37.35 | 30.68 |
| TraesCS5D01G233300.1 | Wheat | plastid | 37.35 | 30.68 |
| EES13906 | Sorghum | plastid | 37.65 | 30.62 |
| GSMUA_Achr5P22830_001 | Banana | cytosol, nucleus, peroxisome | 35.0 | 30.59 |
| CDY00013 | Canola | cytosol, plastid | 26.47 | 30.51 |
| Os08t0439600-00 | Rice | plastid | 36.18 | 30.3 |
| CDY27882 | Canola | nucleus | 25.88 | 30.24 |
| CDY00849 | Canola | nucleus | 25.88 | 30.24 |
| Zm00001d005752_P001 | Maize | plastid | 36.47 | 29.45 |
| Zm00001d020470_P001 | Maize | plastid | 36.47 | 29.45 |
| TraesCS7A01G146000.1 | Wheat | plastid | 29.41 | 29.33 |
| Os06t0181800-00 | Rice | plastid | 30.0 | 29.06 |
| CDY66553 | Canola | cytosol | 23.82 | 28.72 |
| Zm00001d045119_P001 | Maize | plastid | 29.41 | 28.49 |
| Os09t0416600-02 | Rice | plastid | 37.06 | 28.38 |
| HORVU5Hr1G065520.1 | Barley | plastid | 37.65 | 28.32 |
| KXG35635 | Sorghum | plastid | 37.06 | 28.25 |
| EER87970 | Sorghum | plastid | 29.71 | 28.13 |
| CDY00069 | Canola | plastid | 25.29 | 27.92 |
| CDX82547 | Canola | cytosol | 23.82 | 27.84 |
| CDY05690 | Canola | mitochondrion, plastid | 24.41 | 27.67 |
| CDY19961 | Canola | plastid | 24.71 | 27.45 |
| CDX77134 | Canola | cytosol, plastid | 25.88 | 27.24 |
| CDX86317 | Canola | plastid | 24.41 | 27.04 |
| CDX85324 | Canola | plastid | 22.06 | 26.98 |
| CDY48744 | Canola | mitochondrion, plastid | 23.82 | 26.64 |
| TraesCS7B01G048400.1 | Wheat | plastid | 30.0 | 25.95 |
| TraesCS7D01G147500.1 | Wheat | plastid | 29.71 | 25.7 |
| CDY30531 | Canola | plastid | 24.71 | 25.61 |
| HORVU7Hr1G029920.1 | Barley | mitochondrion | 28.82 | 24.62 |
| CDX79683 | Canola | cytosol | 22.94 | 24.61 |
| CDX84556 | Canola | cytosol | 22.94 | 24.3 |
| CDY59819 | Canola | cytosol, mitochondrion, plasma membrane | 26.76 | 20.5 |
| Os02t0695050-00 | Rice | extracellular, golgi, mitochondrion | 15.0 | 19.62 |
| CDY33155 | Canola | cytosol | 22.94 | 19.5 |
| Zm00001d037575_P001 | Maize | cytosol | 13.53 | 19.09 |
Protein Annotations
| EnsemblPlants:CDY51100 | EnsemblPlantsGene:GSBRNA2T00098269001 | InterPro:DUF868_pln | PANTHER:PTHR31972 | PANTHER:PTHR31972:SF3 | PFAM:PF05910 |
| ProteinID:CDY51100 | ProteinID:CDY51100.1 | SEG:seg | UniParc:UPI0004EE3AE3 | UniProt:A0A078IJ79 | MapMan:35.2 |
Description
BnaCnng20030DBnaCnng20030D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IJ79]
Coordinates
chrLK032967:-:3178..4260
Molecular Weight (calculated)
37648.7 Da
IEP (calculated)
9.930
GRAVY (calculated)
-0.267
Length
340 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPSPIVSGD PNLTTCLYQT DHGVFHLTWS RTFLGGHSLN LFLHSQDYYN NHSSPLSFSS LSSLSSLASF RLTLNTLTFW RKRGSKLISS NIQVLWDLTR
101: AKFESGSEPR SGFYVAVIVD GEVGLLVGDS GDARVKSPAK PQALVMRKEH VFGGSVFTTK ARFGGKNREI KIDCCVDEDA RLCFSVDSKT VLEVKRLRWK
201: FRGNERVEID GVAVQISWDV YNWLFQGKGL GHAVFMFRFE SDPEERVGNG NDVVLWKRRK CGSGFKGMVE WRKMRRRFVK SKRSSSSSSM SMSSASSACS
301: SSVLEWASSA DESEYGGGGS SGLGSGNGLG FSLLVYAWIK
101: AKFESGSEPR SGFYVAVIVD GEVGLLVGDS GDARVKSPAK PQALVMRKEH VFGGSVFTTK ARFGGKNREI KIDCCVDEDA RLCFSVDSKT VLEVKRLRWK
201: FRGNERVEID GVAVQISWDV YNWLFQGKGL GHAVFMFRFE SDPEERVGNG NDVVLWKRRK CGSGFKGMVE WRKMRRRFVK SKRSSSSSSM SMSSASSACS
301: SSVLEWASSA DESEYGGGGS SGLGSGNGLG FSLLVYAWIK
001: MSPSWLRPTA DHNHPPPQPP SQSPSPLSSG DPNLTTCLYQ TDHGVFYLTW SRTFLGGHSV NLFLHSQDYY NHSSPLSFSS ADLSLSSAVS FHLNLNTLAF
101: WKKRGSRFVS PKIQVFWDLS KAKFDSGSEP RSGFYIAVVV DGEMGLLVGD SVKEAYARAK SAKPPTNPQA LLLRKEHVFG ARVFTTKARF GGKNREISID
201: CRVDEDAKLC FSVDSKQVLQ IKRLRWKFRG NEKVEIDGVH VQISWDVYNW LFQSKSSGDG GGGGGHAVFM FRFESDPEAE EVCETKRKEE EDEKNRNGIV
301: LWKPKKQCGN SFGIKGIVEW RKMRKRFVKS KRSSSSSSIS MSSASSACSS SVMEWASSAD EAEYGGGGCS GSGSGNGLGF SLLVYAWIK
101: WKKRGSRFVS PKIQVFWDLS KAKFDSGSEP RSGFYIAVVV DGEMGLLVGD SVKEAYARAK SAKPPTNPQA LLLRKEHVFG ARVFTTKARF GGKNREISID
201: CRVDEDAKLC FSVDSKQVLQ IKRLRWKFRG NEKVEIDGVH VQISWDVYNW LFQSKSSGDG GGGGGHAVFM FRFESDPEAE EVCETKRKEE EDEKNRNGIV
301: LWKPKKQCGN SFGIKGIVEW RKMRKRFVKS KRSSSSSSIS MSSASSACSS SVMEWASSAD EAEYGGGGCS GSGSGNGLGF SLLVYAWIK
Arabidopsis Description
AT5g11000/T30N20_270 [Source:UniProtKB/TrEMBL;Acc:Q9LEU1]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.