Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040410.1-P | Field mustard | cytosol, nucleus, peroxisome | 97.91 | 98.25 |
| CDY72112 | Canola | cytosol, peroxisome, plastid | 92.33 | 93.97 |
| AT3G04860.1 | Thale cress | plastid | 86.41 | 85.81 |
| CDY21108 | Canola | plastid | 77.7 | 79.08 |
| CDY30020 | Canola | cytosol, plastid | 75.96 | 77.31 |
| CDX86191 | Canola | plastid | 78.4 | 76.79 |
| CDY52485 | Canola | plastid | 78.05 | 76.45 |
| CDY00013 | Canola | cytosol, plastid | 75.96 | 73.9 |
| VIT_14s0030g01760.t01 | Wine grape | cytosol, plastid | 62.72 | 63.16 |
| Solyc01g097790.2.1 | Tomato | cytosol | 63.07 | 60.54 |
| PGSC0003DMT400057872 | Potato | cytosol | 63.07 | 60.54 |
| KRH34070 | Soybean | cytosol, endoplasmic reticulum, nucleus | 62.72 | 59.8 |
| KRG92651 | Soybean | cytosol | 62.37 | 59.67 |
| KRH68710 | Soybean | plastid | 60.98 | 58.92 |
| KRG96949 | Soybean | cytosol, plastid | 62.72 | 58.82 |
| GSMUA_Achr7P07540_001 | Banana | endoplasmic reticulum, nucleus, peroxisome, plastid | 50.87 | 55.94 |
| Os03t0806700-01 | Rice | cytosol, endoplasmic reticulum, peroxisome, plastid | 55.75 | 54.98 |
| GSMUA_Achr7P01840_001 | Banana | cytosol, peroxisome, plastid | 50.52 | 54.92 |
| EER93250 | Sorghum | cytosol, plastid | 54.7 | 53.95 |
| Zm00001d013042_P001 | Maize | plastid | 54.36 | 53.61 |
| GSMUA_Achr5P24690_001 | Banana | cytosol | 53.66 | 53.1 |
| HORVU5Hr1G109570.1 | Barley | cytosol, plastid | 52.96 | 52.05 |
| TraesCS5A01G456500.1 | Wheat | plastid | 52.26 | 51.37 |
| Zm00001d034527_P001 | Maize | plastid | 52.61 | 51.36 |
| Os07t0572300-01 | Rice | plastid | 50.17 | 50.7 |
| CDY59819 | Canola | cytosol, mitochondrion, plasma membrane | 76.66 | 49.55 |
| TraesCS5D01G467300.1 | Wheat | cytosol, plastid | 52.26 | 48.7 |
| HORVU2Hr1G038060.1 | Barley | plastid | 47.39 | 48.57 |
| TraesCS2D01G204300.1 | Wheat | plastid | 47.39 | 48.06 |
| TraesCS2B01G223900.1 | Wheat | plastid | 46.34 | 47.0 |
| TraesCS2A01G196200.1 | Wheat | plastid | 45.99 | 46.64 |
| Zm00001d021869_P001 | Maize | plastid | 45.64 | 46.13 |
| TraesCS5B01G465500.1 | Wheat | plastid | 52.26 | 44.64 |
| OQU90135 | Sorghum | plastid | 46.34 | 39.12 |
| CDY27882 | Canola | nucleus | 37.98 | 37.46 |
| CDY00849 | Canola | nucleus | 37.98 | 37.46 |
| CDX85324 | Canola | plastid | 32.75 | 33.81 |
| CDY05690 | Canola | mitochondrion, plastid | 35.19 | 33.67 |
| CDX77134 | Canola | cytosol, plastid | 37.63 | 33.44 |
| CDX86317 | Canola | plastid | 35.54 | 33.22 |
| CDY48744 | Canola | mitochondrion, plastid | 35.19 | 33.22 |
| CDY19961 | Canola | plastid | 35.19 | 33.01 |
| CDY00069 | Canola | plastid | 35.19 | 32.79 |
| CDY30531 | Canola | plastid | 36.24 | 31.71 |
| CDY66553 | Canola | cytosol | 27.87 | 28.37 |
| CDX82547 | Canola | cytosol | 27.87 | 27.49 |
| CDX79683 | Canola | cytosol | 29.62 | 26.81 |
| CDX84556 | Canola | cytosol | 29.62 | 26.48 |
| CDY51100 | Canola | cytosol | 31.36 | 26.47 |
| CDX69793 | Canola | nucleus | 34.15 | 26.06 |
| CDX85733 | Canola | cytosol, nucleus, plastid | 31.01 | 25.95 |
| CDX97072 | Canola | nucleus | 34.15 | 25.32 |
| CDY56275 | Canola | cytosol | 12.2 | 22.88 |
| CDX76763 | Canola | plastid | 27.18 | 22.35 |
| CDY33155 | Canola | cytosol | 28.22 | 20.25 |
Protein Annotations
| EnsemblPlants:CDY50761 | EnsemblPlantsGene:GSBRNA2T00097448001 | InterPro:DUF868_pln | PANTHER:PTHR31972 | PANTHER:PTHR31972:SF40 | PFAM:PF05910 |
| ProteinID:CDY50761 | ProteinID:CDY50761.1 | UniParc:UPI0004EE3907 | UniProt:A0A078IL71 | MapMan:35.2 | : |
Description
BnaAnng10680DBnaAnng10680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IL71]
Coordinates
chrLK032937:-:68639..69502
Molecular Weight (calculated)
31960.6 Da
IEP (calculated)
9.409
GRAVY (calculated)
-0.106
Length
287 amino acids
Sequence
(BLAST)
(BLAST)
001: MRDFPSCSGE NGVQVANSPS STAGKTAQNL VICIYRCRIR GKTCLITVTW TKSLMGQCVT IGVDDSCNTS LCKVEIKPWL FTKRKGSKNL CNNISVFWDL
101: SSAKFGSSPE PLGGFYVCVV VDKEMTLLLG DMRKEAFKKT NAAPSSSLGA VIIAKREHVF GKRTFETKAR FSNDGKTHDL VIECDVSVSD PCLVVRVDGK
201: VLMKVKRVHW KFRGNDTMVV DRISVEVLWD VHSWFFGLPS SPGHAVFMFR TCQQPVEKTW SFSQQVPTSS KSQSVGFSLV LYAWKNE
101: SSAKFGSSPE PLGGFYVCVV VDKEMTLLLG DMRKEAFKKT NAAPSSSLGA VIIAKREHVF GKRTFETKAR FSNDGKTHDL VIECDVSVSD PCLVVRVDGK
201: VLMKVKRVHW KFRGNDTMVV DRISVEVLWD VHSWFFGLPS SPGHAVFMFR TCQQPVEKTW SFSQQVPTSS KSQSVGFSLV LYAWKNE
001: MRDFPSCSGE NGVQIADSSS SSSAGRNAQN LVICIYRCRI RGRTCLITVT WTKNLMGQCV TVGVDDSCNR SLCKVEIKPW LFTKRKGSKT LEAYACNIDV
101: FWDLSSAKFG SSPEPLGGFY VGVVVDKEMV LLLGDMKKEA FKKTNAAPSS SLGAVFIAKK EHVFGKRTFA TKAQFSGDGK THDLVIECDT SLSDPCLIVR
201: VDGKILMQVQ RLHWKFRGND TIIVNRISVE VLWDVHSWFF GLPSSPGNAV FMFRTCQSVE KTWSFTQVPT SSKSQSFGFS LILYAWKNE
101: FWDLSSAKFG SSPEPLGGFY VGVVVDKEMV LLLGDMKKEA FKKTNAAPSS SLGAVFIAKK EHVFGKRTFA TKAQFSGDGK THDLVIECDT SLSDPCLIVR
201: VDGKILMQVQ RLHWKFRGND TIIVNRISVE VLWDVHSWFF GLPSSPGNAV FMFRTCQSVE KTWSFTQVPT SSKSQSFGFS LILYAWKNE
Arabidopsis Description
AT3g04860/T9J14_19 [Source:UniProtKB/TrEMBL;Acc:Q9CAV2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.