Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX75227 | Canola | plastid | 95.35 | 95.35 |
| CDX81487 | Canola | cytosol | 27.22 | 91.93 |
| CDX81489 | Canola | nucleus | 18.73 | 89.24 |
| CDX81488 | Canola | cytosol, nucleus, plastid | 17.0 | 83.66 |
| CDY61790 | Canola | endoplasmic reticulum, extracellular | 40.64 | 80.95 |
| CDY61791 | Canola | nucleus | 15.4 | 74.84 |
| AT4G32190.1 | Thale cress | plastid | 73.04 | 70.24 |
| VIT_04s0008g05610.t01 | Wine grape | plastid | 51.53 | 50.13 |
| KRH15859 | Soybean | endoplasmic reticulum, vacuole | 45.82 | 48.05 |
| KRH05183 | Soybean | plastid | 48.61 | 47.91 |
| CDY02356 | Canola | cytosol | 9.96 | 45.45 |
| PGSC0003DMT400010993 | Potato | plastid | 45.42 | 44.42 |
| Solyc08g022030.2.1 | Tomato | nucleus | 44.62 | 43.64 |
| Os02t0186400-01 | Rice | plastid | 32.27 | 31.85 |
| HORVU6Hr1G036020.1 | Barley | plastid | 32.14 | 31.27 |
| TraesCS6A01G180500.1 | Wheat | plastid | 31.87 | 31.05 |
| Zm00001d053726_P001 | Maize | plastid | 31.34 | 30.61 |
| TraesCS6D01G164600.1 | Wheat | plastid | 31.21 | 30.4 |
| EES06399 | Sorghum | plastid | 30.68 | 29.84 |
| CDY35289 | Canola | nucleus | 10.62 | 21.39 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 5.44 | 18.06 |
| CDX95298 | Canola | nucleus | 8.5 | 6.44 |
Protein Annotations
| EnsemblPlants:CDX68825 | EnsemblPlantsGene:GSBRNA2T00130545001 | ncoils:Coil | PANTHER:PTHR23160 | PANTHER:PTHR23160:SF11 | ProteinID:CDX68825 |
| ProteinID:CDX68825.1 | SEG:seg | SUPFAM:SSF57997 | UniParc:UPI0004EC3F1E | MapMan:3.2.1.3 | : |
Description
BnaC01g06280D
Coordinates
chrLK031789:+:1443081..1446059
Molecular Weight (calculated)
86269.8 Da
IEP (calculated)
4.645
GRAVY (calculated)
-0.680
Length
753 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFSQAIRLN LSSYSSLSPC QTRVNQKQKT LVAFLTSCRK GKRRSSLTVK SVLNNTRPSF NDNGTAEEPS KILLDKLFAR TQEQTNENSV YPPYSSLGGL
101: ESDLQAALMA LLKREEDLQD AERKVLSEKK KLNRAKEGLE KRERVISEAS LKHESLQEEL KRANVELASQ AREIEELKHK LRERDEELVA MQSSLTFKER
201: ELDRMRVEIS IKTKEASVAS FEFENKSLLL SQANEIVERQ EGEIEALQRA LKEKEEELEV STAAKKLEQE KLRETEANLK KQTEEWLVAQ EEVSKLQGET
301: VKRLGEANET MEDFRRVKKL LTDVRFELIS SREALLSSRE QMGEKEVLLE KQLEELEEQR RSVLSYMQSL RDACGEVESE RVKLRVAEAK NFALEREISI
401: QKELIEELRE ELKKERSLLE QAMHDVSTIQ DELDKRTKEF QFSQTLLQEK ESSLVEAKLE IQHLKSEQAS LELLLQEKDE ELTVARNQLE EVNREVTELK
501: MLMRTREDQL TQATELLKEK DVHLNRIEGE LGSSKIQASE AEMVVGRIAE LTSRLVQDQM QQQPLEKQPY GDYGMENKRL VMELNFTREN LRLKEMEVLA
601: AQRALTLKDE EINVLMGRLE AKEREVKKLK EETVNDSEDL KMLYALAQER IEGRTMGDLA IEKLQLDAAQ LEVEAATSAL QKLAEMSTEL LTQADMSVEA
701: DSDIVVVPEN ENSSADCIAE VKSEVGRLWS LTERLLENAG IVDGTTSTCI NGL
101: ESDLQAALMA LLKREEDLQD AERKVLSEKK KLNRAKEGLE KRERVISEAS LKHESLQEEL KRANVELASQ AREIEELKHK LRERDEELVA MQSSLTFKER
201: ELDRMRVEIS IKTKEASVAS FEFENKSLLL SQANEIVERQ EGEIEALQRA LKEKEEELEV STAAKKLEQE KLRETEANLK KQTEEWLVAQ EEVSKLQGET
301: VKRLGEANET MEDFRRVKKL LTDVRFELIS SREALLSSRE QMGEKEVLLE KQLEELEEQR RSVLSYMQSL RDACGEVESE RVKLRVAEAK NFALEREISI
401: QKELIEELRE ELKKERSLLE QAMHDVSTIQ DELDKRTKEF QFSQTLLQEK ESSLVEAKLE IQHLKSEQAS LELLLQEKDE ELTVARNQLE EVNREVTELK
501: MLMRTREDQL TQATELLKEK DVHLNRIEGE LGSSKIQASE AEMVVGRIAE LTSRLVQDQM QQQPLEKQPY GDYGMENKRL VMELNFTREN LRLKEMEVLA
601: AQRALTLKDE EINVLMGRLE AKEREVKKLK EETVNDSEDL KMLYALAQER IEGRTMGDLA IEKLQLDAAQ LEVEAATSAL QKLAEMSTEL LTQADMSVEA
701: DSDIVVVPEN ENSSADCIAE VKSEVGRLWS LTERLLENAG IVDGTTSTCI NGL
001: MGFSQAIRLN LASFSSPSPC DYCLTRVVNH KQKSLVAFPS ITRRKRHLLL SVQSVLHNTR PNINDNGSAE SANVLFDKLF ARTHRLERQT NQHSVYPDDD
101: DLPYSNLGVL ESDLEAALVA LLKREEDLHD AERKLLSDKN KLNRAKEELE KREKTISEAS LKHESLQEEL KRANVELASQ AREIEELKHK LRERDEERAA
201: LQSSLTLKEE ELEKMRQEIA NRSKEVSMAI SEFESKSQLL SKANEVVKRQ EGEIYALQRA LEEKEEELEI SKATKKLEQE KLRETEANLK KQTEEWLIAQ
301: DEVNKLKEET VKRLGEANET MEDFMKVKKL LTDVRFELIS SREALVFSRE QMEEKELLLE KQLEELEEQR KSVLSYMQSL RDAHTEVESE RVKLRVVEAK
401: NFALEREISV QKELLEDLRE ELQKEKPLLE LAMHDISVIQ DELYKKANAF QVSQNLLQEK ESSLVEAKLE IQHLKSEQAS LELLLQEKDE ELAEARNKLG
501: EVNQEVTELK ALMISREDQL MEATEMLKEK DVHLHRIEGE LGSSKLKVTE AEMVVERIAE LTNRLLMSTT NGQNQNAMRI NNEISIDSMQ QPLEKPHDDY
601: GMENKRLVME LSFTRENLRM KEMEVLAVQR ALTFKDEEIN VVMGRLEAKE QELKKLKEET INDSEDLKVL YALAQERVGE KTMGDLAIEM LQLEAANLEV
701: EAATSALQKL AKMSTELLTQ ADMSIEADTT HTVMPERGYS EGSNECLGEV KTEVVRLWSL TEKLLENAGI VAGTSTCMEG VIL
101: DLPYSNLGVL ESDLEAALVA LLKREEDLHD AERKLLSDKN KLNRAKEELE KREKTISEAS LKHESLQEEL KRANVELASQ AREIEELKHK LRERDEERAA
201: LQSSLTLKEE ELEKMRQEIA NRSKEVSMAI SEFESKSQLL SKANEVVKRQ EGEIYALQRA LEEKEEELEI SKATKKLEQE KLRETEANLK KQTEEWLIAQ
301: DEVNKLKEET VKRLGEANET MEDFMKVKKL LTDVRFELIS SREALVFSRE QMEEKELLLE KQLEELEEQR KSVLSYMQSL RDAHTEVESE RVKLRVVEAK
401: NFALEREISV QKELLEDLRE ELQKEKPLLE LAMHDISVIQ DELYKKANAF QVSQNLLQEK ESSLVEAKLE IQHLKSEQAS LELLLQEKDE ELAEARNKLG
501: EVNQEVTELK ALMISREDQL MEATEMLKEK DVHLHRIEGE LGSSKLKVTE AEMVVERIAE LTNRLLMSTT NGQNQNAMRI NNEISIDSMQ QPLEKPHDDY
601: GMENKRLVME LSFTRENLRM KEMEVLAVQR ALTFKDEEIN VVMGRLEAKE QELKKLKEET INDSEDLKVL YALAQERVGE KTMGDLAIEM LQLEAANLEV
701: EAATSALQKL AKMSTELLTQ ADMSIEADTT HTVMPERGYS EGSNECLGEV KTEVVRLWSL TEKLLENAGI VAGTSTCMEG VIL
Arabidopsis Description
Myosin heavy chain-related protein [Source:UniProtKB/TrEMBL;Acc:Q8H1E5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.