Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 3
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016529.1-P | Field mustard | nucleus | 95.47 | 98.01 |
| CDX83793 | Canola | nucleus | 67.31 | 91.23 |
| CDX83796 | Canola | plastid | 91.26 | 77.9 |
| AT1G19010.1 | Thale cress | nucleus | 64.72 | 62.7 |
| CDY45399 | Canola | nucleus, plastid | 49.19 | 37.72 |
| CDX73119 | Canola | nucleus | 49.51 | 36.96 |
| KRH56999 | Soybean | nucleus | 37.86 | 22.37 |
| VIT_17s0000g07490.t01 | Wine grape | nucleus | 37.86 | 22.03 |
| KRH03382 | Soybean | nucleus | 37.22 | 22.03 |
| Solyc06g071250.2.1 | Tomato | nucleus | 26.21 | 19.47 |
| PGSC0003DMT400062849 | Potato | nucleus | 33.98 | 17.65 |
| GSMUA_Achr3P12880_001 | Banana | nucleus | 28.16 | 14.9 |
| CDX86434 | Canola | nucleus | 24.27 | 14.07 |
| GSMUA_Achr3P28160_001 | Banana | nucleus | 28.48 | 12.83 |
| Os02t0580700-01 | Rice | nucleus | 22.65 | 12.03 |
| CDX85195 | Canola | nucleus | 22.98 | 12.01 |
| Zm00001d050907_P001 | Maize | nucleus | 22.98 | 11.56 |
| Zm00001d016980_P001 | Maize | nucleus | 23.3 | 11.5 |
| TraesCS6B01G228300.1 | Wheat | nucleus | 20.71 | 10.98 |
| TraesCS6A01G198400.1 | Wheat | nucleus | 20.39 | 10.81 |
| TraesCS6D01G184700.1 | Wheat | nucleus | 21.04 | 10.76 |
| GSMUA_Achr9P22660_001 | Banana | nucleus | 24.92 | 10.62 |
| OQU85212 | Sorghum | nucleus | 22.01 | 10.45 |
| Solyc03g113660.2.1 | Tomato | nucleus | 11.0 | 9.71 |
Protein Annotations
| EnsemblPlants:CDX96685 | EnsemblPlantsGene:GSBRNA2T00102899001 | ncoils:Coil | PANTHER:PTHR34778 | PANTHER:PTHR34778:SF1 | ProteinID:CDX96685 |
| ProteinID:CDX96685.1 | SEG:seg | UniParc:UPI0004EE0F99 | MapMan:35.2 | : | : |
Description
BnaA08g22280D
Coordinates
chrLK031895:-:573865..575429
Molecular Weight (calculated)
35412.4 Da
IEP (calculated)
5.611
GRAVY (calculated)
-0.977
Length
309 amino acids
Sequence
(BLAST)
(BLAST)
001: MCFDLNQCFR MWQRLTALKK AYADTILNTA KEAAARVMVS ERRARGYQQE LVAVRDEALR TCLRLKQMYD SKVKEAEMMS LSKQQKIEEL EAQLGEAEDI
101: VGELRMELRE SRYQLEKLIN SHQSNEEENK PINEVVSLAC EDSSNHERTV VASGIIKPHS SDRDMSINRC SYKENKDPCN HTLPSILTRR RDADALEKGD
201: CPNAEEKELL TTSLSPSEKE YVQFTVKRKR KKDERSGSIS PEGGSSSSQE DDESRNRRQK TGEKDNVYLD SFNTESSSRD SRRVAQVARQ LLPFTEKILS
301: QENQSDDVS
101: VGELRMELRE SRYQLEKLIN SHQSNEEENK PINEVVSLAC EDSSNHERTV VASGIIKPHS SDRDMSINRC SYKENKDPCN HTLPSILTRR RDADALEKGD
201: CPNAEEKELL TTSLSPSEKE YVQFTVKRKR KKDERSGSIS PEGGSSSSQE DDESRNRRQK TGEKDNVYLD SFNTESSSRD SRRVAQVARQ LLPFTEKILS
301: QENQSDDVS
001: MTDPEKLTAL KKAYAETILN TAKEAAARVM ITERKARGYQ QELASVRDEA LRACLRLKQI YDSKVKEAEM ISLQKQQKIE ELEAQLGEAE DIVGELRTEL
101: RESRYLLEKL ANGCQTNLSK EEKAPNEAVS LEVREDSSNH ERSVVASVIK PHMSDRDLSI NRCSYKENKD PCLYTLPSIL SRCREAEVVE RNTINGDCAD
201: VESLTEARKE EAKENDIELS TTPLSPSEKQ CIKFSYKRKH NKDGSNSPEG GGSSSQDDDD DDESRSRRHK TGEKDNAYLD SFTSTEPSRD SRRVAQVARQ
301: LLPFSEKKGL QQSQCDDVP
101: RESRYLLEKL ANGCQTNLSK EEKAPNEAVS LEVREDSSNH ERSVVASVIK PHMSDRDLSI NRCSYKENKD PCLYTLPSIL SRCREAEVVE RNTINGDCAD
201: VESLTEARKE EAKENDIELS TTPLSPSEKQ CIKFSYKRKH NKDGSNSPEG GGSSSQDDDD DDESRSRRHK TGEKDNAYLD SFTSTEPSRD SRRVAQVARQ
301: LLPFSEKKGL QQSQCDDVP
Arabidopsis Description
Uncharacterized protein At1g19010 [Source:UniProtKB/TrEMBL;Acc:Q9C5J5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.