Factsheet for Os02t0580700-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G198400.1	Wheat	nucleus	52.75	52.66
TraesCS6B01G228300.1	Wheat	nucleus	52.41	52.32
TraesCS6D01G184700.1	Wheat	nucleus	53.44	51.49
Zm00001d016980_P001	Maize	nucleus	50.0	46.49
Zm00001d050907_P001	Maize	nucleus	48.97	46.42
OQU85212	Sorghum	nucleus	50.0	44.7
AT1G19010.1	Thale cress	nucleus	12.89	23.51
Bra016529.1-P	Field mustard	nucleus	11.86	22.92
CDX96685	Canola	nucleus	12.03	22.65
PGSC0003DMT400062849	Potato	nucleus	22.34	21.85
VIT_17s0000g07490.t01	Wine grape	nucleus	18.73	20.53
Bra015888.1-P	Field mustard	nucleus	11.86	20.47
Solyc06g071250.2.1	Tomato	nucleus	14.6	20.43
CDX83796	Canola	plastid	12.37	19.89
Solyc03g113660.2.1	Tomato	nucleus	11.68	19.43
KRH03382	Soybean	nucleus	17.35	19.35
CDX83793	Canola	nucleus	7.56	19.3
GSMUA_Achr3P12880_001	Banana	nucleus	19.24	19.18
KRH56999	Soybean	nucleus	16.67	18.55
AT1G74860.1	Thale cress	nucleus	12.54	18.25
KRG93451	Soybean	nucleus	16.67	18.2
Solyc02g087450.2.1	Tomato	nucleus	17.01	17.9
PGSC0003DMT400003550	Potato	nucleus	16.67	17.54
KRH18547	Soybean	nucleus	16.15	17.54
VIT_14s0066g02260.t01	Wine grape	nucleus	18.9	17.41
CDY45399	Canola	nucleus, plastid	12.03	17.37
GSMUA_Achr3P28160_001	Banana	nucleus	20.1	17.06
GSMUA_Achr9P22660_001	Banana	nucleus	20.96	16.83
CDX73119	Canola	nucleus	11.86	16.67
CDX86434	Canola	nucleus	14.78	16.14
Bra025333.1-P	Field mustard	nucleus	14.78	16.14
Solyc07g062420.1.1	Tomato	nucleus	5.84	16.11
CDX85195	Canola	nucleus	13.57	13.37

Protein Annotations

EMBL:AK073664	EnsemblPlants:Os02t0580700-01	EnsemblPlantsGene:Os02g0580700	EntrezGene:4329779	ncoils:Coil	PANTHER:PTHR34778
PANTHER:PTHR34778:SF2	ProteinID:BAD27629.1	ProteinID:BAD29582.1	ProteinID:BAF09152.1	ProteinID:BAS79417.1	RefSeq:XP_015622958.1
SEG:seg	UniParc:UPI00003CE47D	UniProt:Q6EP38	MapMan:35.2	:	:

Description

Conserved hypothetical protein. (Os02t0580700-01)

Coordinates

chr2:+:22355195..22362054

Molecular Weight (calculated)

63470.0 Da

IEP (calculated)

7.253

GRAVY (calculated)

-0.805

Length

582 amino acids

Sequence
(BLAST)

001: MAESQVEGMR KAYAEIMLNM AQESAARVLA AERRAAALAG GLAAAREDGV AALVRLKAIM EARIKEAESQ SLANINKIKE LQEQLHGAQD TVASLQIELQ
101: RSNTELEQAR STLAEERRNN LRSCNKINSN KNSSSSSRKH LQGRVSSKSK NTAKESGAVE NLETLYRCDS DLGSFMARTK NPELYRNGCT QRIRAIKQRS
201: PNSDTSLVEN SKQTSALNSR SKTGKTDTNR NPQSTRSIME QILQTKFLAN CKRKRGRRSR PSYMHDNSGE HGQTEYKSSD TSDGNGCLLL LQALEQDLSP
301: LKASSGSVGE GLADQKDELL KDEKDADLNL HPASPGPNDV LSVNNMQMKR RKRSKTMRVF ESDFEAKAAP EFGNTLPKSS NNNSMLNSEQ SSDPPAGNNG
401: PVLQCTAENL MHVTDAANAD QLKSENSSPL VPQSTESEIG DEGNSRVDHK ECRTPDNNAI VLEEVNVDKS CIILASDGAD SSIVSSLDKE ENAKEATSGV
501: AVQAEGARYI KYTFNRRKRK AAPLDSTPQG AVPEKSSSVV CPSENHEPHA KPETQDLVIE SPPGDNQLIH VAQQLILLSA QK

Best Arabidopsis Sequence Match ( AT1G19010.1 )
(BLAST)

001: MTDPEKLTAL KKAYAETILN TAKEAAARVM ITERKARGYQ QELASVRDEA LRACLRLKQI YDSKVKEAEM ISLQKQQKIE ELEAQLGEAE DIVGELRTEL
101: RESRYLLEKL ANGCQTNLSK EEKAPNEAVS LEVREDSSNH ERSVVASVIK PHMSDRDLSI NRCSYKENKD PCLYTLPSIL SRCREAEVVE RNTINGDCAD
201: VESLTEARKE EAKENDIELS TTPLSPSEKQ CIKFSYKRKH NKDGSNSPEG GGSSSQDDDD DDESRSRRHK TGEKDNAYLD SFTSTEPSRD SRRVAQVARQ
301: LLPFSEKKGL QQSQCDDVP

Arabidopsis Description

Uncharacterized protein At1g19010 [Source:UniProtKB/TrEMBL;Acc:Q9C5J5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.