Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra016529.1-P | Field mustard | nucleus | 63.95 | 67.77 |
CDX96685 | Canola | nucleus | 62.7 | 64.72 |
CDX83793 | Canola | nucleus | 45.77 | 64.04 |
CDX83796 | Canola | plastid | 63.32 | 55.8 |
AT1G74860.1 | Thale cress | nucleus | 42.32 | 33.75 |
VIT_17s0000g07490.t01 | Wine grape | nucleus | 38.56 | 23.16 |
KRH56999 | Soybean | nucleus | 36.36 | 22.18 |
KRH03382 | Soybean | nucleus | 36.05 | 22.03 |
Solyc06g071250.2.1 | Tomato | nucleus | 26.65 | 20.43 |
PGSC0003DMT400062849 | Potato | nucleus | 32.92 | 17.65 |
GSMUA_Achr3P12880_001 | Banana | nucleus | 23.82 | 13.01 |
Os02t0580700-01 | Rice | nucleus | 23.51 | 12.89 |
GSMUA_Achr3P28160_001 | Banana | nucleus | 26.33 | 12.24 |
Zm00001d050907_P001 | Maize | nucleus | 22.57 | 11.73 |
TraesCS6B01G228300.1 | Wheat | nucleus | 21.32 | 11.66 |
TraesCS6A01G198400.1 | Wheat | nucleus | 21.0 | 11.49 |
TraesCS6D01G184700.1 | Wheat | nucleus | 21.63 | 11.42 |
Zm00001d016980_P001 | Maize | nucleus | 22.26 | 11.34 |
Solyc03g113660.2.1 | Tomato | nucleus | 12.23 | 11.14 |
OQU85212 | Sorghum | nucleus | 21.94 | 10.75 |
GSMUA_Achr9P22660_001 | Banana | nucleus | 24.14 | 10.62 |
Protein Annotations
MapMan:35.2 | EntrezGene:838482 | ProteinID:AEE29790.1 | ProteinID:AEE29791.1 | EMBL:AF360209 | ArrayExpress:AT1G19010 |
EnsemblPlantsGene:AT1G19010 | RefSeq:AT1G19010 | TAIR:AT1G19010 | RefSeq:AT1G19010-TAIR-G | EnsemblPlants:AT1G19010.1 | TAIR:AT1G19010.1 |
EMBL:AY040057 | EMBL:AY087721 | Unigene:At.15072 | ncoils:Coil | GO:GO:0008150 | RefSeq:NP_564068.2 |
RefSeq:NP_849690.1 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR34778 |
PANTHER:PTHR34778:SF1 | UniProt:Q9C5J5 | UniParc:UPI00000A0057 | SEG:seg | : | : |
Description
Uncharacterized protein At1g19010 [Source:UniProtKB/TrEMBL;Acc:Q9C5J5]
Coordinates
chr1:+:6565494..6567662
Molecular Weight (calculated)
35994.9 Da
IEP (calculated)
4.997
GRAVY (calculated)
-0.973
Length
319 amino acids
Sequence
(BLAST)
(BLAST)
001: MTDPEKLTAL KKAYAETILN TAKEAAARVM ITERKARGYQ QELASVRDEA LRACLRLKQI YDSKVKEAEM ISLQKQQKIE ELEAQLGEAE DIVGELRTEL
101: RESRYLLEKL ANGCQTNLSK EEKAPNEAVS LEVREDSSNH ERSVVASVIK PHMSDRDLSI NRCSYKENKD PCLYTLPSIL SRCREAEVVE RNTINGDCAD
201: VESLTEARKE EAKENDIELS TTPLSPSEKQ CIKFSYKRKH NKDGSNSPEG GGSSSQDDDD DDESRSRRHK TGEKDNAYLD SFTSTEPSRD SRRVAQVARQ
301: LLPFSEKKGL QQSQCDDVP
101: RESRYLLEKL ANGCQTNLSK EEKAPNEAVS LEVREDSSNH ERSVVASVIK PHMSDRDLSI NRCSYKENKD PCLYTLPSIL SRCREAEVVE RNTINGDCAD
201: VESLTEARKE EAKENDIELS TTPLSPSEKQ CIKFSYKRKH NKDGSNSPEG GGSSSQDDDD DDESRSRRHK TGEKDNAYLD SFTSTEPSRD SRRVAQVARQ
301: LLPFSEKKGL QQSQCDDVP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.