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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • cytosol 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra016529.1-P Field mustard nucleus 63.95 67.77
CDX96685 Canola nucleus 62.7 64.72
CDX83793 Canola nucleus 45.77 64.04
CDX83796 Canola plastid 63.32 55.8
AT1G74860.1 Thale cress nucleus 42.32 33.75
VIT_17s0000g07490.t01 Wine grape nucleus 38.56 23.16
KRH56999 Soybean nucleus 36.36 22.18
KRH03382 Soybean nucleus 36.05 22.03
Solyc06g071250.2.1 Tomato nucleus 26.65 20.43
PGSC0003DMT400062849 Potato nucleus 32.92 17.65
GSMUA_Achr3P12880_001 Banana nucleus 23.82 13.01
Os02t0580700-01 Rice nucleus 23.51 12.89
GSMUA_Achr3P28160_001 Banana nucleus 26.33 12.24
Zm00001d050907_P001 Maize nucleus 22.57 11.73
TraesCS6B01G228300.1 Wheat nucleus 21.32 11.66
TraesCS6A01G198400.1 Wheat nucleus 21.0 11.49
TraesCS6D01G184700.1 Wheat nucleus 21.63 11.42
Zm00001d016980_P001 Maize nucleus 22.26 11.34
Solyc03g113660.2.1 Tomato nucleus 12.23 11.14
OQU85212 Sorghum nucleus 21.94 10.75
GSMUA_Achr9P22660_001 Banana nucleus 24.14 10.62
Protein Annotations
MapMan:35.2EntrezGene:838482ProteinID:AEE29790.1ProteinID:AEE29791.1EMBL:AF360209ArrayExpress:AT1G19010
EnsemblPlantsGene:AT1G19010RefSeq:AT1G19010TAIR:AT1G19010RefSeq:AT1G19010-TAIR-GEnsemblPlants:AT1G19010.1TAIR:AT1G19010.1
EMBL:AY040057EMBL:AY087721Unigene:At.15072ncoils:CoilGO:GO:0008150RefSeq:NP_564068.2
RefSeq:NP_849690.1PO:PO:0000013PO:PO:0000037PO:PO:0000084PO:PO:0000230PO:PO:0000293
PO:PO:0001016PO:PO:0001017PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185
PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115
PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006
PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031
PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038
PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025195PO:PO:0025281PANTHER:PTHR34778
PANTHER:PTHR34778:SF1UniProt:Q9C5J5UniParc:UPI00000A0057SEG:seg::
Description
Uncharacterized protein At1g19010 [Source:UniProtKB/TrEMBL;Acc:Q9C5J5]
Coordinates
chr1:+:6565494..6567662
Molecular Weight (calculated)
35994.9 Da
IEP (calculated)
4.997
GRAVY (calculated)
-0.973
Length
319 amino acids
Sequence
(BLAST)
001: MTDPEKLTAL KKAYAETILN TAKEAAARVM ITERKARGYQ QELASVRDEA LRACLRLKQI YDSKVKEAEM ISLQKQQKIE ELEAQLGEAE DIVGELRTEL
101: RESRYLLEKL ANGCQTNLSK EEKAPNEAVS LEVREDSSNH ERSVVASVIK PHMSDRDLSI NRCSYKENKD PCLYTLPSIL SRCREAEVVE RNTINGDCAD
201: VESLTEARKE EAKENDIELS TTPLSPSEKQ CIKFSYKRKH NKDGSNSPEG GGSSSQDDDD DDESRSRRHK TGEKDNAYLD SFTSTEPSRD SRRVAQVARQ
301: LLPFSEKKGL QQSQCDDVP
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.