Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P22660_001 | Banana | nucleus | 34.4 | 32.55 |
| GSMUA_Achr3P12880_001 | Banana | nucleus | 26.82 | 31.51 |
| Bra016529.1-P | Field mustard | nucleus | 13.12 | 29.9 |
| Bra015888.1-P | Field mustard | nucleus | 14.43 | 29.38 |
| CDX96685 | Canola | nucleus | 12.83 | 28.48 |
| KRH56999 | Soybean | nucleus | 21.14 | 27.72 |
| KRH03382 | Soybean | nucleus | 20.85 | 27.39 |
| CDX83796 | Canola | plastid | 14.29 | 27.07 |
| AT1G19010.1 | Thale cress | nucleus | 12.24 | 26.33 |
| VIT_17s0000g07490.t01 | Wine grape | nucleus | 19.97 | 25.8 |
| CDY45399 | Canola | nucleus, plastid | 15.01 | 25.56 |
| CDX73119 | Canola | nucleus | 15.16 | 25.12 |
| VIT_14s0066g02260.t01 | Wine grape | nucleus | 23.03 | 25.0 |
| AT1G74860.1 | Thale cress | nucleus | 14.29 | 24.5 |
| KRG93451 | Soybean | nucleus | 18.66 | 24.02 |
| KRH18547 | Soybean | nucleus | 18.51 | 23.69 |
| CDX83793 | Canola | nucleus | 7.73 | 23.25 |
| PGSC0003DMT400062849 | Potato | nucleus | 19.53 | 22.52 |
| Solyc03g113660.2.1 | Tomato | nucleus | 11.37 | 22.29 |
| TraesCS6B01G228300.1 | Wheat | nucleus | 17.93 | 21.1 |
| TraesCS6A01G198400.1 | Wheat | nucleus | 17.78 | 20.93 |
| Solyc06g071250.2.1 | Tomato | nucleus | 12.54 | 20.67 |
| PGSC0003DMT400003550 | Potato | nucleus | 16.62 | 20.61 |
| TraesCS6D01G184700.1 | Wheat | nucleus | 18.08 | 20.53 |
| Os02t0580700-01 | Rice | nucleus | 17.06 | 20.1 |
| Solyc02g087450.2.1 | Tomato | nucleus | 16.18 | 20.07 |
| Zm00001d050907_P001 | Maize | nucleus | 17.06 | 19.06 |
| Zm00001d016980_P001 | Maize | nucleus | 17.06 | 18.69 |
| OQU85212 | Sorghum | nucleus | 17.64 | 18.59 |
| Solyc07g062420.1.1 | Tomato | nucleus | 5.69 | 18.48 |
| CDX85195 | Canola | nucleus | 12.39 | 14.38 |
| Bra025333.1-P | Field mustard | nucleus | 11.08 | 14.26 |
| CDX86434 | Canola | nucleus | 11.08 | 14.26 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P28160_001 | EnsemblPlants:GSMUA_Achr3T28160_001 | EnsemblPlantsGene:GSMUA_Achr3G28160_001 | ncoils:Coil | PANTHER:PTHR34778 | SEG:seg |
| UniParc:UPI0002950B6A | UniProt:M0SII2 | MapMan:35.2 | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr3G28160_001]
Coordinates
chr3:+:27528031..27535936
Molecular Weight (calculated)
76902.3 Da
IEP (calculated)
9.012
GRAVY (calculated)
-0.795
Length
686 amino acids
Sequence
(BLAST)
(BLAST)
001: MTKLSIAEPI VPSVNADCGC PFRVITDTAE RWGEGERTGG KKPAAERNHS FPPPPPPSPL LPPLFLSAAS LNRQPLPMAE DAERMAALKR AFADVILNTA
101: KESAVRILAS ERRVLQLQQS LSLAREESLD MLLRLKSIMD SKINESEKSN LSQVRKIQKL EVQLGEAKGT INFLRSELKR LNSELDQRMD IQAEFPDGKS
201: TGHNATSEKY NCKENIHNSD SHLYSKRGAK SVPNSDCCFT KGVTQDEPLN NLIAVDNYAG NPDLASIILS NKEPELYRNG CTQRIRAFER NQVSGKEFST
301: QIHDQVSDIK SETMMCENGK PERSHTKDFA MVKKPVCHRK RRVHCKKHIM KSTECGYHDM RHCRSLESSH SKFSMATDHM SNIKNETNMC ENKKAERPWA
401: IDFGMAEKIV RRKMRRQKRM RPAKCITYHD MQHYGLLGSN HSKVGENDKD RSAGNSQRAS GEAPLKTLDS CSPQMSGENQ ETTKDQKTKL NKFSNHRISG
501: LLDGNRIMTR RSVLKLCNTC EDHTGGSHTS GSGATFQENS LKESLVLGTS EVIDDAVSDA VKNGTLLHEI MLSKADDKLA EDLGTSITKE GHDDCKDEPF
601: KPCGPAAEDR SDKILKYTFQ RKRKRVSIDS KVDSTSLEGS MSKQTVEKDN AVLDPQKSSL LVESSRESRR LAQVARQLIS LSERRW
101: KESAVRILAS ERRVLQLQQS LSLAREESLD MLLRLKSIMD SKINESEKSN LSQVRKIQKL EVQLGEAKGT INFLRSELKR LNSELDQRMD IQAEFPDGKS
201: TGHNATSEKY NCKENIHNSD SHLYSKRGAK SVPNSDCCFT KGVTQDEPLN NLIAVDNYAG NPDLASIILS NKEPELYRNG CTQRIRAFER NQVSGKEFST
301: QIHDQVSDIK SETMMCENGK PERSHTKDFA MVKKPVCHRK RRVHCKKHIM KSTECGYHDM RHCRSLESSH SKFSMATDHM SNIKNETNMC ENKKAERPWA
401: IDFGMAEKIV RRKMRRQKRM RPAKCITYHD MQHYGLLGSN HSKVGENDKD RSAGNSQRAS GEAPLKTLDS CSPQMSGENQ ETTKDQKTKL NKFSNHRISG
501: LLDGNRIMTR RSVLKLCNTC EDHTGGSHTS GSGATFQENS LKESLVLGTS EVIDDAVSDA VKNGTLLHEI MLSKADDKLA EDLGTSITKE GHDDCKDEPF
601: KPCGPAAEDR SDKILKYTFQ RKRKRVSIDS KVDSTSLEGS MSKQTVEKDN AVLDPQKSSL LVESSRESRR LAQVARQLIS LSERRW
001: MADPETLAAL KRAYADTILN TTKEAAARVM VSEKKARRYQ QELVTVRNEA LHTLVRLKQM LDSKVKETEM QSLKQQQKVE ELEAQLGEAE DIVGELRLEL
101: RVLHDELKKL TDGQKHLKKN HEENLCWNNR DAAVSVMPEV SCSHENTEAV GFCIPVEQNG SVVANGIKVP SLTRINSINR CSYKDNKDQC HYTLPSILTK
201: RRETEGLAQM IHTVDSSMAN GVLSSSVEVG DVNDGVCLHE VSSCKIVESL EMSGCADATD SISSVKDGEA PIVSPNSSQK DVGTLISLKT SPPREHENDR
301: KLEISETEAR KEEKESCENM EVSASPLCEE TPVLALSKNR CIKYTFKRKR KKEVLSNLEG DSSFEESRNM KQKTVEKDDG YLESLKPSFT SESSRDVVYA
101: RVLHDELKKL TDGQKHLKKN HEENLCWNNR DAAVSVMPEV SCSHENTEAV GFCIPVEQNG SVVANGIKVP SLTRINSINR CSYKDNKDQC HYTLPSILTK
201: RRETEGLAQM IHTVDSSMAN GVLSSSVEVG DVNDGVCLHE VSSCKIVESL EMSGCADATD SISSVKDGEA PIVSPNSSQK DVGTLISLKT SPPREHENDR
301: KLEISETEAR KEEKESCENM EVSASPLCEE TPVLALSKNR CIKYTFKRKR KKEVLSNLEG DSSFEESRNM KQKTVEKDDG YLESLKPSFT SESSRDVVYA
Arabidopsis Description
At1g74860 [Source:UniProtKB/TrEMBL;Acc:Q9SSG6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.