CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH03382	Soybean	nucleus	89.48	89.66
VIT_17s0000g07490.t01	Wine grape	nucleus	40.15	39.55
Bra016529.1-P	Field mustard	nucleus	22.75	39.53
Bra015888.1-P	Field mustard	nucleus	25.43	39.47
CDX96685	Canola	nucleus	22.37	37.86
AT1G19010.1	Thale cress	nucleus	22.18	36.36
CDX83796	Canola	plastid	23.14	33.43
CDY45399	Canola	nucleus, plastid	25.24	32.75
CDX73119	Canola	nucleus	25.43	32.13
AT1G74860.1	Thale cress	nucleus	24.09	31.5
Solyc06g071250.2.1	Tomato	nucleus	24.28	30.53
PGSC0003DMT400062849	Potato	nucleus	34.61	30.42
CDX83793	Canola	nucleus	13.0	29.82
Solyc03g113660.2.1	Tomato	nucleus	19.12	28.57
KRG93451	Soybean	nucleus	27.34	26.83
KRH18547	Soybean	nucleus	25.81	25.19
GSMUA_Achr3P12880_001	Banana	nucleus	24.86	22.26
GSMUA_Achr3P28160_001	Banana	nucleus	27.72	21.14
GSMUA_Achr9P22660_001	Banana	nucleus	27.92	20.14
TraesCS6A01G198400.1	Wheat	nucleus	20.84	18.7
TraesCS6B01G228300.1	Wheat	nucleus	20.84	18.7
TraesCS6D01G184700.1	Wheat	nucleus	21.41	18.54
Os02t0580700-01	Rice	nucleus	18.55	16.67
Zm00001d050907_P001	Maize	nucleus	19.5	16.61
Zm00001d016980_P001	Maize	nucleus	19.5	16.29
OQU85212	Sorghum	nucleus	19.5	15.67

Protein Annotations

EMBL:ACUP02002805	EnsemblPlants:KRH56999	EnsemblPlantsGene:GLYMA_05G032400	EntrezGene:100783348	ncoils:Coil	PANTHER:PTHR34778
PANTHER:PTHR34778:SF1	ProteinID:KRH56999	ProteinID:KRH56999.1	SEG:seg	UniParc:UPI000233A0FE	UniProt:I1JZV0
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:2835362..2841192

Molecular Weight (calculated)

58798.9 Da

IEP (calculated)

5.922

GRAVY (calculated)

-0.812

Length

523 amino acids

Sequence
(BLAST)

001: MEDSEKLTAL KKAYADIILN TAKEAAARIM VSERKVTRFQ QELVSTKEEA LRMLLRLKQM FDSKVSEAEL MSLNQQKKIE ELEAQLQEAE EIVRDLRAEL
101: RETQAELENV TKHQMQPLVE QNTEAEVAAQ ESFLQKNRLD PYDGSIYSAP GLQFESVSIS ENRNPIVNGS NDSSKFCGSH DHTNNCYIHN PDFASIVIRR
201: KEPKLYRNGC TQRIHAFERS LFDGNMSVSG NLDNVQNENL VSVHEEGKTM TVSTNAKADI ISEKEKPDEL KVVKAVADLV KVPVQRKKRK FGKRKAIIKS
301: ILHSNQVKET NKESHLSCAK DSTLVLDNDD PSRVSSSMAC ENEAQKDLMS PFADVPTDTT ATNEKSGPHS NAENGEVFVK AGSAWNITKD DKESLDKSDL
401: TRQESLSAES VEVPACKDVE ASNGSLDKMD SKVSDLDEKV SNRSTGDKFK FTFCRKRKKE AISCDDVDCS QDNTSSKKKC GEKQDDHVEP QKSCTMTESS
501: RDSRRLAQVA RQLISLSEKK WWQ

Best Arabidopsis Sequence Match ( AT1G74860.1 )
(BLAST)

001: MADPETLAAL KRAYADTILN TTKEAAARVM VSEKKARRYQ QELVTVRNEA LHTLVRLKQM LDSKVKETEM QSLKQQQKVE ELEAQLGEAE DIVGELRLEL
101: RVLHDELKKL TDGQKHLKKN HEENLCWNNR DAAVSVMPEV SCSHENTEAV GFCIPVEQNG SVVANGIKVP SLTRINSINR CSYKDNKDQC HYTLPSILTK
201: RRETEGLAQM IHTVDSSMAN GVLSSSVEVG DVNDGVCLHE VSSCKIVESL EMSGCADATD SISSVKDGEA PIVSPNSSQK DVGTLISLKT SPPREHENDR
301: KLEISETEAR KEEKESCENM EVSASPLCEE TPVLALSKNR CIKYTFKRKR KKEVLSNLEG DSSFEESRNM KQKTVEKDDG YLESLKPSFT SESSRDVVYA

Arabidopsis Description

At1g74860 [Source:UniProtKB/TrEMBL;Acc:Q9SSG6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.