Factsheet for Solyc03g113660.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400062849	Potato	nucleus	74.86	44.03
KRH03382	Soybean	nucleus	28.86	19.35
KRH56999	Soybean	nucleus	28.57	19.12
VIT_17s0000g07490.t01	Wine grape	nucleus	27.14	17.89
Solyc06g071250.2.1	Tomato	nucleus	18.86	15.87
CDX83793	Canola	nucleus	10.29	15.79
Bra015888.1-P	Field mustard	nucleus	14.0	14.54
GSMUA_Achr3P12880_001	Banana	nucleus	22.57	13.53
TraesCS6D01G184700.1	Wheat	nucleus	22.0	12.75
TraesCS6A01G198400.1	Wheat	nucleus	21.14	12.69
TraesCS6B01G228300.1	Wheat	nucleus	20.86	12.52
AT1G19010.1	Thale cress	nucleus	11.14	12.23
CDX73119	Canola	nucleus	14.29	12.08
Os02t0580700-01	Rice	nucleus	19.43	11.68
CDY45399	Canola	nucleus, plastid	13.43	11.66
AT1G74860.1	Thale cress	nucleus	13.14	11.5
GSMUA_Achr3P28160_001	Banana	nucleus	22.29	11.37
Bra016529.1-P	Field mustard	nucleus	9.71	11.3
CDX96685	Canola	nucleus	9.71	11.0
Zm00001d050907_P001	Maize	nucleus	18.57	10.59
Zm00001d016980_P001	Maize	nucleus	18.0	10.06
GSMUA_Achr9P22660_001	Banana	nucleus	20.57	9.93
CDX83796	Canola	plastid	9.71	9.39
Solyc02g087450.2.1	Tomato	nucleus	14.57	9.22
OQU85212	Sorghum	nucleus	17.14	9.22
Solyc07g062420.1.1	Tomato	nucleus	4.0	6.64

Protein Annotations

EnsemblPlants:Solyc03g113660.2.1	EnsemblPlantsGene:Solyc03g113660.2	PANTHER:PTHR34778	PANTHER:PTHR34778:SF1	SEG:seg	UniParc:UPI0002767DFC
UniProt:K4BKL8	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr3:+:63737415..63740168

Molecular Weight (calculated)

38649.3 Da

IEP (calculated)

9.112

GRAVY (calculated)

-0.880

Length

350 amino acids

Sequence
(BLAST)

001: MKQKSQGHQS CSKMVQLGKP SISGPDLPSI ILRSKVPELY RNGCTQRIRA CEGNLLDGDL SVSKGVEKNK NENGNAVDEG EGIYSAPINK IDDVVNPQEN
101: IQQADGLLSS WHMLTSFRRK RRRAIRNRKA GYPSPGSSPD HFLNIDKTSN TGSLTAHSTH SSPDRDCAPG EDPSEMSDSL LIEKTEPGMK LGSTKISGNE
201: LQSAETSSVL NSTVNDELAM AKMDSPRQES RTLENLAVHI DRPDFVTVSS QPGNSLSKIA DVYGEVPSET PKDRVIKYTF QRKRKREQLS VSEESARIEK
301: SSPKEVNGEK ANGHVEPKMS NSATESSRDS RRMAQVARQL ISLSEKKWWK

Best Arabidopsis Sequence Match ( AT1G19010.1 )
(BLAST)

001: MTDPEKLTAL KKAYAETILN TAKEAAARVM ITERKARGYQ QELASVRDEA LRACLRLKQI YDSKVKEAEM ISLQKQQKIE ELEAQLGEAE DIVGELRTEL
101: RESRYLLEKL ANGCQTNLSK EEKAPNEAVS LEVREDSSNH ERSVVASVIK PHMSDRDLSI NRCSYKENKD PCLYTLPSIL SRCREAEVVE RNTINGDCAD
201: VESLTEARKE EAKENDIELS TTPLSPSEKQ CIKFSYKRKH NKDGSNSPEG GGSSSQDDDD DDESRSRRHK TGEKDNAYLD SFTSTEPSRD SRRVAQVARQ
301: LLPFSEKKGL QQSQCDDVP

Arabidopsis Description

Uncharacterized protein At1g19010 [Source:UniProtKB/TrEMBL;Acc:Q9C5J5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.