Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P28160_001 | Banana | nucleus | 32.55 | 34.4 |
| GSMUA_Achr3P12880_001 | Banana | nucleus | 23.45 | 29.11 |
| Bra015888.1-P | Field mustard | nucleus | 13.38 | 28.78 |
| KRH56999 | Soybean | nucleus | 20.14 | 27.92 |
| KRH03382 | Soybean | nucleus | 19.72 | 27.39 |
| Bra016529.1-P | Field mustard | nucleus | 10.62 | 25.58 |
| CDX96685 | Canola | nucleus | 10.62 | 24.92 |
| VIT_17s0000g07490.t01 | Wine grape | nucleus | 18.07 | 24.67 |
| CDY45399 | Canola | nucleus, plastid | 13.52 | 24.32 |
| AT1G19010.1 | Thale cress | nucleus | 10.62 | 24.14 |
| VIT_14s0066g02260.t01 | Wine grape | nucleus | 20.83 | 23.89 |
| CDX73119 | Canola | nucleus | 13.38 | 23.43 |
| AT1G74860.1 | Thale cress | nucleus | 12.14 | 22.0 |
| PGSC0003DMT400003550 | Potato | nucleus | 16.69 | 21.88 |
| CDX83796 | Canola | plastid | 10.76 | 21.55 |
| PGSC0003DMT400062849 | Potato | nucleus | 17.52 | 21.34 |
| KRH18547 | Soybean | nucleus | 15.59 | 21.08 |
| KRG93451 | Soybean | nucleus | 15.45 | 21.01 |
| Os02t0580700-01 | Rice | nucleus | 16.83 | 20.96 |
| TraesCS6A01G198400.1 | Wheat | nucleus | 16.69 | 20.75 |
| Solyc02g087450.2.1 | Tomato | nucleus | 15.72 | 20.61 |
| CDX83793 | Canola | nucleus | 6.48 | 20.61 |
| TraesCS6B01G228300.1 | Wheat | nucleus | 16.55 | 20.58 |
| Solyc03g113660.2.1 | Tomato | nucleus | 9.93 | 20.57 |
| TraesCS6D01G184700.1 | Wheat | nucleus | 17.1 | 20.53 |
| Solyc06g071250.2.1 | Tomato | nucleus | 11.45 | 19.95 |
| Zm00001d050907_P001 | Maize | nucleus | 16.41 | 19.38 |
| Solyc07g062420.1.1 | Tomato | nucleus | 5.38 | 18.48 |
| OQU85212 | Sorghum | nucleus | 16.28 | 18.13 |
| Zm00001d016980_P001 | Maize | nucleus | 15.59 | 18.05 |
| CDX85195 | Canola | nucleus | 12.55 | 15.4 |
| CDX86434 | Canola | nucleus | 10.9 | 14.82 |
| Bra025333.1-P | Field mustard | nucleus | 10.9 | 14.82 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P22660_001 | EnsemblPlants:GSMUA_Achr9T22660_001 | EnsemblPlantsGene:GSMUA_Achr9G22660_001 | ncoils:Coil | PANTHER:PTHR34778 | SEG:seg |
| UniParc:UPI000296D3CF | UniProt:M0U2M5 | MapMan:35.2 | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr9G22660_001]
Coordinates
chr9:-:27764780..27771050
Molecular Weight (calculated)
82174.7 Da
IEP (calculated)
9.168
GRAVY (calculated)
-0.957
Length
725 amino acids
Sequence
(BLAST)
(BLAST)
001: MAALKRAYAD IILNTAKESA ARILASEGKV LQLQRSLSLT KEDSLAMLLR LKAIMDSKVM IHESEKANLS QVGKIQELEA QLSEAKVTID CLRSELKRLN
101: SELDHKRDIQ AEFLNGKSTV HNTPSEKYNG ATEDEPLNNL ISSDTYAVKP DLTSIILSNK EPELCRSGYT QRIHAFEWNP VTGKELTSQM HDQVSDIKSE
201: TLMCENEKSE KSDTKDFAMK EKIVCHRKQK VHCQNHVMKS TECSTYHDMQ HYRSLDTKHI KVSTPGPDKV PNSKGKIMCE NEKAERPWTK DFVMVEKLVR
301: RRKMRRRRRV MRPTKRVIYH DKQHYASLDP THSKVGQTDV DISADNAHWT GGEVPPKTLN SCSPQVSGQD QETTKSQRTK LNKNFSNKSS ELLNGNKIMT
401: RRTVLRQSNT YSTGSEVPPR TLNSCSPQAS DKDQETTRSQ RTKLNNFFSN NSSGLSNDNR IMTRSNVLKQ CSAHGTGSEV HPKTLKFCSS QVSGEDQGTE
501: SQRNKLNKIF SNKNSGLLNG NRITTRRTVL KQCNASREDH IDRIHTSNNG TCPENSMKEP FAASTGEMIN DALSDEYVKN DKELEEKMST KPDHIPAEEL
601: DNSVTKENNE TINEPHYDYR DELSGHCGRA TEVGGDKILK YTFQRKRKRG SLDGKVEPTS ITENISKRKV GKDDSELEPQ ESSIVVESCR PEPQKSSLVV
701: ESSRDSRRLA QVARQLISLS ERRWW
101: SELDHKRDIQ AEFLNGKSTV HNTPSEKYNG ATEDEPLNNL ISSDTYAVKP DLTSIILSNK EPELCRSGYT QRIHAFEWNP VTGKELTSQM HDQVSDIKSE
201: TLMCENEKSE KSDTKDFAMK EKIVCHRKQK VHCQNHVMKS TECSTYHDMQ HYRSLDTKHI KVSTPGPDKV PNSKGKIMCE NEKAERPWTK DFVMVEKLVR
301: RRKMRRRRRV MRPTKRVIYH DKQHYASLDP THSKVGQTDV DISADNAHWT GGEVPPKTLN SCSPQVSGQD QETTKSQRTK LNKNFSNKSS ELLNGNKIMT
401: RRTVLRQSNT YSTGSEVPPR TLNSCSPQAS DKDQETTRSQ RTKLNNFFSN NSSGLSNDNR IMTRSNVLKQ CSAHGTGSEV HPKTLKFCSS QVSGEDQGTE
501: SQRNKLNKIF SNKNSGLLNG NRITTRRTVL KQCNASREDH IDRIHTSNNG TCPENSMKEP FAASTGEMIN DALSDEYVKN DKELEEKMST KPDHIPAEEL
601: DNSVTKENNE TINEPHYDYR DELSGHCGRA TEVGGDKILK YTFQRKRKRG SLDGKVEPTS ITENISKRKV GKDDSELEPQ ESSIVVESCR PEPQKSSLVV
701: ESSRDSRRLA QVARQLISLS ERRWW
001: MADPETLAAL KRAYADTILN TTKEAAARVM VSEKKARRYQ QELVTVRNEA LHTLVRLKQM LDSKVKETEM QSLKQQQKVE ELEAQLGEAE DIVGELRLEL
101: RVLHDELKKL TDGQKHLKKN HEENLCWNNR DAAVSVMPEV SCSHENTEAV GFCIPVEQNG SVVANGIKVP SLTRINSINR CSYKDNKDQC HYTLPSILTK
201: RRETEGLAQM IHTVDSSMAN GVLSSSVEVG DVNDGVCLHE VSSCKIVESL EMSGCADATD SISSVKDGEA PIVSPNSSQK DVGTLISLKT SPPREHENDR
301: KLEISETEAR KEEKESCENM EVSASPLCEE TPVLALSKNR CIKYTFKRKR KKEVLSNLEG DSSFEESRNM KQKTVEKDDG YLESLKPSFT SESSRDVVYA
101: RVLHDELKKL TDGQKHLKKN HEENLCWNNR DAAVSVMPEV SCSHENTEAV GFCIPVEQNG SVVANGIKVP SLTRINSINR CSYKDNKDQC HYTLPSILTK
201: RRETEGLAQM IHTVDSSMAN GVLSSSVEVG DVNDGVCLHE VSSCKIVESL EMSGCADATD SISSVKDGEA PIVSPNSSQK DVGTLISLKT SPPREHENDR
301: KLEISETEAR KEEKESCENM EVSASPLCEE TPVLALSKNR CIKYTFKRKR KKEVLSNLEG DSSFEESRNM KQKTVEKDDG YLESLKPSFT SESSRDVVYA
Arabidopsis Description
At1g74860 [Source:UniProtKB/TrEMBL;Acc:Q9SSG6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.