Factsheet for VIT_14s0066g02260.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_17s0000g07490.t01	Wine grape	nucleus	29.59	35.22
KRG93451	Soybean	nucleus	27.85	33.02
KRH18547	Soybean	nucleus	26.42	31.16
PGSC0003DMT400003550	Potato	nucleus	25.95	29.66
Solyc02g087450.2.1	Tomato	nucleus	25.0	28.57
GSMUA_Achr3P12880_001	Banana	nucleus	25.47	27.57
Solyc07g062420.1.1	Tomato	nucleus	7.75	23.22
GSMUA_Achr3P28160_001	Banana	nucleus	25.0	23.03
CDX86434	Canola	nucleus	18.04	21.39
Bra025333.1-P	Field mustard	nucleus	18.04	21.39
GSMUA_Achr9P22660_001	Banana	nucleus	23.89	20.83
CDX85195	Canola	nucleus	18.51	19.8
Os02t0580700-01	Rice	nucleus	17.41	18.9
TraesCS6A01G198400.1	Wheat	nucleus	16.46	17.84
TraesCS6B01G228300.1	Wheat	nucleus	15.98	17.32
TraesCS6D01G184700.1	Wheat	nucleus	16.14	16.89
Zm00001d016980_P001	Maize	nucleus	16.14	16.29
Zm00001d050907_P001	Maize	nucleus	15.82	16.29
OQU85212	Sorghum	nucleus	15.66	15.21

Protein Annotations

ArrayExpress:VIT_14s0066g02260	EMBL:FN596252	EnsemblPlants:VIT_14s0066g02260.t01	EnsemblPlantsGene:VIT_14s0066g02260	EntrezGene:100853631	EntrezGene:LOC100853631
ncoils:Coil	PANTHER:PTHR34778	PANTHER:PTHR34778:SF2	ProteinID:CCB58576	ProteinID:CCB58576.1	RefSeq:XP_003633816
RefSeq:XP_003633816.1	SEG:seg	UniParc:UPI000210A193	UniProt:F6HV58	wikigene:100853631	wikigene:LOC100853631
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr14:+:28470400..28474898

Molecular Weight (calculated)

70916.4 Da

IEP (calculated)

8.564

GRAVY (calculated)

-0.874

Length

632 amino acids

Sequence
(BLAST)

001: MALKKAYAEI ILNTSKEAAA RIMASERKAL RFQQDLCCLK DEALRMLLRL RQMIDFQTTE AETTSLRQRS RIEELEAQLH EAEDIIADLR VELKETKGEL
101: QKMRNKEVQP LNGQLPKVDA TSPENGTYND RLNTTELMSA SPSDSGFEIL PTSDIKDTPM HQRVLDNMGC NTTRQTESSS DSHLDNYYAD NPDLAPIIMR
201: SKEPELYRNG RTQRIRALES NLLNGELPHE DTADQYSLIK NESVIEADGK GEGLHTVPSF KAKNMDRMKN LAELEDGKQL SGSSNEDQPV KVIWRLRRRR
301: TRYGTRKTTS RKPFPHQLIK SSQPSPVLSH CKTYSDSITD RVKSGEGACT VSSPKGDDMD YVKNYTELGQ KMQHNGICYK DQAFKSTYRR YTKRDVRYSA
401: AFEPSCRSPL DQLTESSQPS CFLSHCNTNS CSVSSNVKSG EEQLQIAENE AKMKPPTRLN PGLTLIKTDI DPISGSVNVT LSVKDVNKSG AVQIAANDDT
501: ELADEHMSVK KDAAGSSRLL SCKLNLEMVD AQSMNSDSID TNASEAANGS PSQGDNNRLL KYTFQRKRKK ESLNNPDENS SPEKSTIKRR AMRKQNGAPE
601: GQKSNLINQS SRDSRRLAQV ARQLISLSGK RW

Best Arabidopsis Sequence Match ( AT1G19010.1 )
(BLAST)

001: MTDPEKLTAL KKAYAETILN TAKEAAARVM ITERKARGYQ QELASVRDEA LRACLRLKQI YDSKVKEAEM ISLQKQQKIE ELEAQLGEAE DIVGELRTEL
101: RESRYLLEKL ANGCQTNLSK EEKAPNEAVS LEVREDSSNH ERSVVASVIK PHMSDRDLSI NRCSYKENKD PCLYTLPSIL SRCREAEVVE RNTINGDCAD
201: VESLTEARKE EAKENDIELS TTPLSPSEKQ CIKFSYKRKH NKDGSNSPEG GGSSSQDDDD DDESRSRRHK TGEKDNAYLD SFTSTEPSRD SRRVAQVARQ
301: LLPFSEKKGL QQSQCDDVP

Arabidopsis Description

Uncharacterized protein At1g19010 [Source:UniProtKB/TrEMBL;Acc:Q9C5J5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.