CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra025333.1-P	Field mustard	nucleus	100.0	100.0
CDX85195	Canola	nucleus	50.47	45.52
CDX96685	Canola	nucleus	14.07	24.27
CDX83796	Canola	plastid	14.26	20.99
CDX73119	Canola	nucleus	15.2	19.57
CDY45399	Canola	nucleus, plastid	14.63	19.35
KRG93451	Soybean	nucleus	18.95	18.95
CDX83793	Canola	nucleus	8.07	18.86
KRH18547	Soybean	nucleus	18.39	18.28
VIT_14s0066g02260.t01	Wine grape	nucleus	21.39	18.04
PGSC0003DMT400003550	Potato	nucleus	18.01	17.36
Solyc02g087450.2.1	Tomato	nucleus	18.01	17.36
Solyc07g062420.1.1	Tomato	nucleus	6.75	17.06
GSMUA_Achr3P12880_001	Banana	nucleus	17.45	15.92
Os02t0580700-01	Rice	nucleus	16.14	14.78
TraesCS6A01G198400.1	Wheat	nucleus	14.63	13.38
Zm00001d016980_P001	Maize	nucleus	15.57	13.26
TraesCS6B01G228300.1	Wheat	nucleus	14.26	13.04
TraesCS6D01G184700.1	Wheat	nucleus	14.63	12.91
Zm00001d050907_P001	Maize	nucleus	14.26	12.38
OQU85212	Sorghum	nucleus	14.82	12.14
GSMUA_Achr3P28160_001	Banana	nucleus	14.26	11.08
GSMUA_Achr9P22660_001	Banana	nucleus	14.82	10.9

Protein Annotations

EnsemblPlants:CDX86434	EnsemblPlantsGene:GSBRNA2T00144577001	ncoils:Coil	PANTHER:PTHR34778	ProteinID:CDX86434	ProteinID:CDX86434.1
SEG:seg	UniParc:UPI000253FBC1	MapMan:35.2	:	:	:

Description

BnaA06g31510D

Coordinates

chrLK031845:+:1543551..1545449

Molecular Weight (calculated)

59947.6 Da

IEP (calculated)

4.694

GRAVY (calculated)

-0.850

Length

533 amino acids

Sequence
(BLAST)

001: MEESHKTTAL KKAYAEIILN TAKESAARVM LSDRKSARFH HDLSQTKEEA LRLLVRLKHM IDAKTIEGDV ISSNQQRQID VLEAQLHEAE DIITDLRSEV
101: RWVRDRLEKA KAFESLEEEE ETVYVHPEVV VESVNPSSLD DVECENEEKQ FDGLSVVDTL QAYESQERNV VSEEEAEMVS AHKVDPEVLV ESWNPNQEDR
201: DECEDDESLE KAKASESQER NLVNKEEETV STHKVDQEVV VVESLKPDKE VADTCKIHDE KQFNGLGVAS LKENDDVCES ELDGDIRIKK FELSRNGCTQ
301: RIHALERISS SSADEEEQQG TTDKDSEESL SSGKAGTLEN TRCLVLALRA SSAEVVTIPS NALGIKKARK LRGRRKRRFG KPKAKSVRPQ SQLIKPCQSQ
401: SNITSSKTST SDGEESMETH LSVESEEVDD LKTCGELKEH LQLKRTLDSD VLVSCEGEEE SVVPCTKMAS ESKVTAVVSD QISESPPRAN VNRLLKYTFQ
501: RKRKRGSADD SNNLPRKHQE NKAQDQIEST LSK

Best Arabidopsis Sequence Match ( AT1G19010.1 )
(BLAST)

001: MTDPEKLTAL KKAYAETILN TAKEAAARVM ITERKARGYQ QELASVRDEA LRACLRLKQI YDSKVKEAEM ISLQKQQKIE ELEAQLGEAE DIVGELRTEL
101: RESRYLLEKL ANGCQTNLSK EEKAPNEAVS LEVREDSSNH ERSVVASVIK PHMSDRDLSI NRCSYKENKD PCLYTLPSIL SRCREAEVVE RNTINGDCAD
201: VESLTEARKE EAKENDIELS TTPLSPSEKQ CIKFSYKRKH NKDGSNSPEG GGSSSQDDDD DDESRSRRHK TGEKDNAYLD SFTSTEPSRD SRRVAQVARQ
301: LLPFSEKKGL QQSQCDDVP

Arabidopsis Description

Uncharacterized protein At1g19010 [Source:UniProtKB/TrEMBL;Acc:Q9C5J5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.