Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRG93451 | Soybean | nucleus | 82.46 | 82.93 |
VIT_14s0066g02260.t01 | Wine grape | nucleus | 31.16 | 26.42 |
KRH56999 | Soybean | nucleus | 25.19 | 25.81 |
KRH03382 | Soybean | nucleus | 24.81 | 25.48 |
Solyc07g062420.1.1 | Tomato | nucleus | 8.58 | 21.8 |
GSMUA_Achr3P12880_001 | Banana | nucleus | 23.69 | 21.75 |
PGSC0003DMT400003550 | Potato | nucleus | 21.83 | 21.16 |
Solyc02g087450.2.1 | Tomato | nucleus | 21.83 | 21.16 |
GSMUA_Achr3P28160_001 | Banana | nucleus | 23.69 | 18.51 |
CDX86434 | Canola | nucleus | 18.28 | 18.39 |
Bra025333.1-P | Field mustard | nucleus | 18.28 | 18.39 |
TraesCS6B01G228300.1 | Wheat | nucleus | 19.22 | 17.67 |
TraesCS6A01G198400.1 | Wheat | nucleus | 19.03 | 17.5 |
TraesCS6D01G184700.1 | Wheat | nucleus | 19.59 | 17.38 |
CDX85195 | Canola | nucleus | 18.1 | 16.41 |
Os02t0580700-01 | Rice | nucleus | 17.54 | 16.15 |
Zm00001d050907_P001 | Maize | nucleus | 18.1 | 15.8 |
GSMUA_Achr9P22660_001 | Banana | nucleus | 21.08 | 15.59 |
Zm00001d016980_P001 | Maize | nucleus | 18.1 | 15.5 |
OQU85212 | Sorghum | nucleus | 18.47 | 15.21 |
Protein Annotations
EMBL:ACUP02008091 | EnsemblPlants:KRH18547 | EnsemblPlantsGene:GLYMA_13G067300 | EntrezGene:102665456 | ncoils:Coil | PANTHER:PTHR34778 |
PANTHER:PTHR34778:SF2 | ProteinID:KRH18547 | ProteinID:KRH18547.1 | ProteinID:KRH18548.1 | SEG:seg | UniParc:UPI0002961848 |
UniProt:K7LXE1 | MapMan:35.2 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr13:+:16695633..16700683
Molecular Weight (calculated)
61030.8 Da
IEP (calculated)
9.285
GRAVY (calculated)
-0.797
Length
536 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGRESKSSL TSQTEPRDNP HSRFSTPMQQ HQSHEMVALK KAYADVILNT VKEAAGRVMV AERRALMFQQ EHASSKEEAL HMLMRLKQMM DAKTAEAEKA
101: SLEKQRKIDE LEAQLNEAED IITDLRAELK LVYLELEMAR NNQVRPLSGQ KSQNEKQAVT FQESAKPEIS ISSPHKELRC VTSCDVANKS LTMNVLDNKC
201: CNAKQQTEQL RISNLEDSCG HDSDFASIIT KSKEPELFRN GFTQRIHALE GNLLDEKLLK QDVHNQHYGK KLRIIAKDSN GQVAKYSALT EKMEIKKHIK
301: HHKIPKRKIY SYFWSHFLSC KIHLNDNCKS SKVVCSLPSI KLSAISKWKR KRRRHPHLGM KSFAFRSCKP SFSLKQCPSV SDNKKCCEDE YDAKMKSVAP
401: LTDVEPVLGT TGVTESVQAV NKFKLVEKAI EKDNELLNLE ESAAQNLTGP SSDMKVEVFD VPSTNTDLED AKAFEKNDRS ASQVNDSRPL KYTFQRKRKK
501: ESLGNTDQNI DSEKRIVKRR LEDKQNGALE HQNLAS
101: SLEKQRKIDE LEAQLNEAED IITDLRAELK LVYLELEMAR NNQVRPLSGQ KSQNEKQAVT FQESAKPEIS ISSPHKELRC VTSCDVANKS LTMNVLDNKC
201: CNAKQQTEQL RISNLEDSCG HDSDFASIIT KSKEPELFRN GFTQRIHALE GNLLDEKLLK QDVHNQHYGK KLRIIAKDSN GQVAKYSALT EKMEIKKHIK
301: HHKIPKRKIY SYFWSHFLSC KIHLNDNCKS SKVVCSLPSI KLSAISKWKR KRRRHPHLGM KSFAFRSCKP SFSLKQCPSV SDNKKCCEDE YDAKMKSVAP
401: LTDVEPVLGT TGVTESVQAV NKFKLVEKAI EKDNELLNLE ESAAQNLTGP SSDMKVEVFD VPSTNTDLED AKAFEKNDRS ASQVNDSRPL KYTFQRKRKK
501: ESLGNTDQNI DSEKRIVKRR LEDKQNGALE HQNLAS
001: MADPETLAAL KRAYADTILN TTKEAAARVM VSEKKARRYQ QELVTVRNEA LHTLVRLKQM LDSKVKETEM QSLKQQQKVE ELEAQLGEAE DIVGELRLEL
101: RVLHDELKKL TDGQKHLKKN HEENLCWNNR DAAVSVMPEV SCSHENTEAV GFCIPVEQNG SVVANGIKVP SLTRINSINR CSYKDNKDQC HYTLPSILTK
201: RRETEGLAQM IHTVDSSMAN GVLSSSVEVG DVNDGVCLHE VSSCKIVESL EMSGCADATD SISSVKDGEA PIVSPNSSQK DVGTLISLKT SPPREHENDR
301: KLEISETEAR KEEKESCENM EVSASPLCEE TPVLALSKNR CIKYTFKRKR KKEVLSNLEG DSSFEESRNM KQKTVEKDDG YLESLKPSFT SESSRDVVYA
101: RVLHDELKKL TDGQKHLKKN HEENLCWNNR DAAVSVMPEV SCSHENTEAV GFCIPVEQNG SVVANGIKVP SLTRINSINR CSYKDNKDQC HYTLPSILTK
201: RRETEGLAQM IHTVDSSMAN GVLSSSVEVG DVNDGVCLHE VSSCKIVESL EMSGCADATD SISSVKDGEA PIVSPNSSQK DVGTLISLKT SPPREHENDR
301: KLEISETEAR KEEKESCENM EVSASPLCEE TPVLALSKNR CIKYTFKRKR KKEVLSNLEG DSSFEESRNM KQKTVEKDDG YLESLKPSFT SESSRDVVYA
Arabidopsis Description
At1g74860 [Source:UniProtKB/TrEMBL;Acc:Q9SSG6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.