Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86434 | Canola | nucleus | 100.0 | 100.0 |
| Bra016529.1-P | Field mustard | nucleus | 14.07 | 24.92 |
| Bra015888.1-P | Field mustard | nucleus | 15.2 | 24.04 |
| KRG93451 | Soybean | nucleus | 18.95 | 18.95 |
| KRH18547 | Soybean | nucleus | 18.39 | 18.28 |
| VIT_14s0066g02260.t01 | Wine grape | nucleus | 21.39 | 18.04 |
| Solyc02g087450.2.1 | Tomato | nucleus | 18.01 | 17.36 |
| PGSC0003DMT400003550 | Potato | nucleus | 18.01 | 17.36 |
| Solyc07g062420.1.1 | Tomato | nucleus | 6.75 | 17.06 |
| GSMUA_Achr3P12880_001 | Banana | nucleus | 17.45 | 15.92 |
| Os02t0580700-01 | Rice | nucleus | 16.14 | 14.78 |
| TraesCS6A01G198400.1 | Wheat | nucleus | 14.63 | 13.38 |
| Zm00001d016980_P001 | Maize | nucleus | 15.57 | 13.26 |
| TraesCS6B01G228300.1 | Wheat | nucleus | 14.26 | 13.04 |
| TraesCS6D01G184700.1 | Wheat | nucleus | 14.63 | 12.91 |
| Zm00001d050907_P001 | Maize | nucleus | 14.26 | 12.38 |
| OQU85212 | Sorghum | nucleus | 14.82 | 12.14 |
| GSMUA_Achr3P28160_001 | Banana | nucleus | 14.26 | 11.08 |
| GSMUA_Achr9P22660_001 | Banana | nucleus | 14.82 | 10.9 |
Protein Annotations
Description
AT1G19010 (E=1e-024) | unknown protein
Coordinates
chrA06:+:22112511..22114339
Molecular Weight (calculated)
59947.6 Da
IEP (calculated)
4.694
GRAVY (calculated)
-0.850
Length
533 amino acids
Sequence
(BLAST)
(BLAST)
001: MEESHKTTAL KKAYAEIILN TAKESAARVM LSDRKSARFH HDLSQTKEEA LRLLVRLKHM IDAKTIEGDV ISSNQQRQID VLEAQLHEAE DIITDLRSEV
101: RWVRDRLEKA KAFESLEEEE ETVYVHPEVV VESVNPSSLD DVECENEEKQ FDGLSVVDTL QAYESQERNV VSEEEAEMVS AHKVDPEVLV ESWNPNQEDR
201: DECEDDESLE KAKASESQER NLVNKEEETV STHKVDQEVV VVESLKPDKE VADTCKIHDE KQFNGLGVAS LKENDDVCES ELDGDIRIKK FELSRNGCTQ
301: RIHALERISS SSADEEEQQG TTDKDSEESL SSGKAGTLEN TRCLVLALRA SSAEVVTIPS NALGIKKARK LRGRRKRRFG KPKAKSVRPQ SQLIKPCQSQ
401: SNITSSKTST SDGEESMETH LSVESEEVDD LKTCGELKEH LQLKRTLDSD VLVSCEGEEE SVVPCTKMAS ESKVTAVVSD QISESPPRAN VNRLLKYTFQ
501: RKRKRGSADD SNNLPRKHQE NKAQDQIEST LSK
101: RWVRDRLEKA KAFESLEEEE ETVYVHPEVV VESVNPSSLD DVECENEEKQ FDGLSVVDTL QAYESQERNV VSEEEAEMVS AHKVDPEVLV ESWNPNQEDR
201: DECEDDESLE KAKASESQER NLVNKEEETV STHKVDQEVV VVESLKPDKE VADTCKIHDE KQFNGLGVAS LKENDDVCES ELDGDIRIKK FELSRNGCTQ
301: RIHALERISS SSADEEEQQG TTDKDSEESL SSGKAGTLEN TRCLVLALRA SSAEVVTIPS NALGIKKARK LRGRRKRRFG KPKAKSVRPQ SQLIKPCQSQ
401: SNITSSKTST SDGEESMETH LSVESEEVDD LKTCGELKEH LQLKRTLDSD VLVSCEGEEE SVVPCTKMAS ESKVTAVVSD QISESPPRAN VNRLLKYTFQ
501: RKRKRGSADD SNNLPRKHQE NKAQDQIEST LSK
001: MTDPEKLTAL KKAYAETILN TAKEAAARVM ITERKARGYQ QELASVRDEA LRACLRLKQI YDSKVKEAEM ISLQKQQKIE ELEAQLGEAE DIVGELRTEL
101: RESRYLLEKL ANGCQTNLSK EEKAPNEAVS LEVREDSSNH ERSVVASVIK PHMSDRDLSI NRCSYKENKD PCLYTLPSIL SRCREAEVVE RNTINGDCAD
201: VESLTEARKE EAKENDIELS TTPLSPSEKQ CIKFSYKRKH NKDGSNSPEG GGSSSQDDDD DDESRSRRHK TGEKDNAYLD SFTSTEPSRD SRRVAQVARQ
301: LLPFSEKKGL QQSQCDDVP
101: RESRYLLEKL ANGCQTNLSK EEKAPNEAVS LEVREDSSNH ERSVVASVIK PHMSDRDLSI NRCSYKENKD PCLYTLPSIL SRCREAEVVE RNTINGDCAD
201: VESLTEARKE EAKENDIELS TTPLSPSEKQ CIKFSYKRKH NKDGSNSPEG GGSSSQDDDD DDESRSRRHK TGEKDNAYLD SFTSTEPSRD SRRVAQVARQ
301: LLPFSEKKGL QQSQCDDVP
Arabidopsis Description
Uncharacterized protein At1g19010 [Source:UniProtKB/TrEMBL;Acc:Q9C5J5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.