Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU85212 | Sorghum | nucleus | 84.19 | 80.95 |
| Zm00001d050907_P001 | Maize | nucleus | 78.91 | 80.46 |
| Os02t0580700-01 | Rice | nucleus | 46.49 | 50.0 |
| TraesCS6A01G198400.1 | Wheat | nucleus | 41.69 | 44.77 |
| TraesCS6B01G228300.1 | Wheat | nucleus | 41.37 | 44.43 |
| TraesCS6D01G184700.1 | Wheat | nucleus | 42.01 | 43.54 |
| Bra016529.1-P | Field mustard | nucleus | 11.34 | 23.59 |
| CDX96685 | Canola | nucleus | 11.5 | 23.3 |
| Bra015888.1-P | Field mustard | nucleus | 12.46 | 23.15 |
| AT1G19010.1 | Thale cress | nucleus | 11.34 | 22.26 |
| PGSC0003DMT400062849 | Potato | nucleus | 19.81 | 20.84 |
| KRH03382 | Soybean | nucleus | 16.93 | 20.31 |
| KRH56999 | Soybean | nucleus | 16.29 | 19.5 |
| GSMUA_Achr3P12880_001 | Banana | nucleus | 18.05 | 19.35 |
| CDX83796 | Canola | plastid | 11.18 | 19.34 |
| CDX73119 | Canola | nucleus | 12.62 | 19.08 |
| CDX83793 | Canola | nucleus | 6.87 | 18.86 |
| CDY45399 | Canola | nucleus, plastid | 12.14 | 18.86 |
| KRH18547 | Soybean | nucleus | 15.5 | 18.1 |
| VIT_17s0000g07490.t01 | Wine grape | nucleus | 15.34 | 18.08 |
| Solyc03g113660.2.1 | Tomato | nucleus | 10.06 | 18.0 |
| PGSC0003DMT400003550 | Potato | nucleus | 15.65 | 17.72 |
| KRG93451 | Soybean | nucleus | 14.86 | 17.45 |
| Solyc02g087450.2.1 | Tomato | nucleus | 15.34 | 17.36 |
| GSMUA_Achr3P28160_001 | Banana | nucleus | 18.69 | 17.06 |
| Solyc06g071250.2.1 | Tomato | nucleus | 11.02 | 16.59 |
| AT1G74860.1 | Thale cress | nucleus | 10.54 | 16.5 |
| VIT_14s0066g02260.t01 | Wine grape | nucleus | 16.29 | 16.14 |
| Solyc07g062420.1.1 | Tomato | nucleus | 5.43 | 16.11 |
| GSMUA_Achr9P22660_001 | Banana | nucleus | 18.05 | 15.59 |
| CDX86434 | Canola | nucleus | 13.26 | 15.57 |
| Bra025333.1-P | Field mustard | nucleus | 13.26 | 15.57 |
| CDX85195 | Canola | nucleus | 12.46 | 13.2 |
Protein Annotations
| EMBL:BT068269 | EnsemblPlants:Zm00001d016980_P001 | EnsemblPlants:Zm00001d016980_T001 | EnsemblPlantsGene:Zm00001d016980 | EntrezGene:100383781 | ncoils:Coil |
| PANTHER:PTHR34778 | PANTHER:PTHR34778:SF2 | ProteinID:AQK72073.1 | SEG:seg | UniParc:UPI000195CFEB | UniProt:C0PJ00 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr5:+:181873389..181879865
Molecular Weight (calculated)
69472.2 Da
IEP (calculated)
8.384
GRAVY (calculated)
-0.758
Length
626 amino acids
Sequence
(BLAST)
(BLAST)
001: MADSQAEAMK KAYAGIMLNM AQESAARVLA AERRAAALAA GLEAAKEDGV ATLLRVKAIM EARIKEKDLE SLVHVKKIKE LEEQLHGSQN AMASLKVELQ
101: RAITELELTK KTLADERINS LPTSNNVYSN KNGSPLSKIH QQGGNILLKN KKFADKSDDT CLVPITEKEN EAVENLEDMD RRSPDLPSLM VRNKKPKFYH
201: NGCTQRIHAL KQQTQSTDAF WKQNQKQVTA LNSCSKARMN NAAKNPRSIM EQILQTNFLG KFKRKRGRRS RPSYKHDNSS EHGEAEYKLS DRSESDGNGC
301: LLLLQALEQD LSPSKMSAEH DGEALTDLKE DFKMSRRDAE LSRCNAFPEL IDVLAVNNMQ MKRRKRTKTV RVLEDDFSDT KSVPEPDNIQ LMTSEKSMSG
401: NQLVSGMTKN RSDTPTRNSD RFLKCATGNM MHQTDAGNGQ FDPEISSAVF LQSIKSETTD YGNLAVDQQE LITPNNNTAS LKEVNEDGSC SLASPKTDTS
501: TLSSVDKENL KASSGVPVQA LEKQDVSVGS SLNKKDHTKA SSGASMQAEG ARHIKYTFNR RKRKGMSINS TPQRAVPEES SDLCSPTNKQ KLHPDHVELN
601: HLIDSPQGDS LLVQVAEQLI LLSEHM
101: RAITELELTK KTLADERINS LPTSNNVYSN KNGSPLSKIH QQGGNILLKN KKFADKSDDT CLVPITEKEN EAVENLEDMD RRSPDLPSLM VRNKKPKFYH
201: NGCTQRIHAL KQQTQSTDAF WKQNQKQVTA LNSCSKARMN NAAKNPRSIM EQILQTNFLG KFKRKRGRRS RPSYKHDNSS EHGEAEYKLS DRSESDGNGC
301: LLLLQALEQD LSPSKMSAEH DGEALTDLKE DFKMSRRDAE LSRCNAFPEL IDVLAVNNMQ MKRRKRTKTV RVLEDDFSDT KSVPEPDNIQ LMTSEKSMSG
401: NQLVSGMTKN RSDTPTRNSD RFLKCATGNM MHQTDAGNGQ FDPEISSAVF LQSIKSETTD YGNLAVDQQE LITPNNNTAS LKEVNEDGSC SLASPKTDTS
501: TLSSVDKENL KASSGVPVQA LEKQDVSVGS SLNKKDHTKA SSGASMQAEG ARHIKYTFNR RKRKGMSINS TPQRAVPEES SDLCSPTNKQ KLHPDHVELN
601: HLIDSPQGDS LLVQVAEQLI LLSEHM
001: MTDPEKLTAL KKAYAETILN TAKEAAARVM ITERKARGYQ QELASVRDEA LRACLRLKQI YDSKVKEAEM ISLQKQQKIE ELEAQLGEAE DIVGELRTEL
101: RESRYLLEKL ANGCQTNLSK EEKAPNEAVS LEVREDSSNH ERSVVASVIK PHMSDRDLSI NRCSYKENKD PCLYTLPSIL SRCREAEVVE RNTINGDCAD
201: VESLTEARKE EAKENDIELS TTPLSPSEKQ CIKFSYKRKH NKDGSNSPEG GGSSSQDDDD DDESRSRRHK TGEKDNAYLD SFTSTEPSRD SRRVAQVARQ
301: LLPFSEKKGL QQSQCDDVP
101: RESRYLLEKL ANGCQTNLSK EEKAPNEAVS LEVREDSSNH ERSVVASVIK PHMSDRDLSI NRCSYKENKD PCLYTLPSIL SRCREAEVVE RNTINGDCAD
201: VESLTEARKE EAKENDIELS TTPLSPSEKQ CIKFSYKRKH NKDGSNSPEG GGSSSQDDDD DDESRSRRHK TGEKDNAYLD SFTSTEPSRD SRRVAQVARQ
301: LLPFSEKKGL QQSQCDDVP
Arabidopsis Description
Uncharacterized protein At1g19010 [Source:UniProtKB/TrEMBL;Acc:Q9C5J5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.