CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH56999	Soybean	nucleus	89.66	89.48
VIT_17s0000g07490.t01	Wine grape	nucleus	40.61	39.92
Bra015888.1-P	Field mustard	nucleus	25.1	38.87
Bra016529.1-P	Field mustard	nucleus	22.41	38.87
CDX96685	Canola	nucleus	22.03	37.22
AT1G19010.1	Thale cress	nucleus	22.03	36.05
CDX83796	Canola	plastid	22.8	32.87
CDY45399	Canola	nucleus, plastid	24.71	32.01
AT1G74860.1	Thale cress	nucleus	24.33	31.75
CDX73119	Canola	nucleus	24.9	31.4
PGSC0003DMT400062849	Potato	nucleus	35.06	30.76
Solyc06g071250.2.1	Tomato	nucleus	23.95	30.05
Solyc03g113660.2.1	Tomato	nucleus	19.35	28.86
CDX83793	Canola	nucleus	12.45	28.51
KRG93451	Soybean	nucleus	26.25	25.7
KRH18547	Soybean	nucleus	25.48	24.81
GSMUA_Achr3P12880_001	Banana	nucleus	25.1	22.43
GSMUA_Achr3P28160_001	Banana	nucleus	27.39	20.85
GSMUA_Achr9P22660_001	Banana	nucleus	27.39	19.72
TraesCS6A01G198400.1	Wheat	nucleus	21.26	19.04
TraesCS6B01G228300.1	Wheat	nucleus	21.07	18.87
TraesCS6D01G184700.1	Wheat	nucleus	21.65	18.71
Zm00001d050907_P001	Maize	nucleus	20.69	17.59
Os02t0580700-01	Rice	nucleus	19.35	17.35
Zm00001d016980_P001	Maize	nucleus	20.31	16.93
OQU85212	Sorghum	nucleus	20.11	16.13

Protein Annotations

EMBL:ACUP02010345	EnsemblPlants:KRH03382	EnsemblPlantsGene:GLYMA_17G094200	EntrezGene:100797926	ncoils:Coil	PANTHER:PTHR34778
PANTHER:PTHR34778:SF1	ProteinID:KRH03382	ProteinID:KRH03382.1	SEG:seg	UniParc:UPI000294AAE8	UniProt:K7MKT1
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr17:-:7361162..7367292

Molecular Weight (calculated)

58630.4 Da

IEP (calculated)

5.609

GRAVY (calculated)

-0.864

Length

522 amino acids

Sequence
(BLAST)

001: MEDSEKLTAL KKAYADIILN TAKEAAARIM VSERKATRFQ QELVSTKEEA LRMLLRLKQK FDSKVSEAEL TSLNQQKKIE ELEAQLQEAE EIVRDLRAEL
101: RETQAELENV TKHQMHPPVE QNTGAEIEAQ EIFLQENRLD PYDGSVYTAP GLQFESVSIS DNRNPVVNGS NDSSKFCGSH DHTNNCYIHN PDFASIVIRR
201: KEPKLYRNGC TQRIHAFERS LFDGNMSVSG NLDNVQNEMV VSVHEEGKAM TVSTNAKADT ISEKEKPDEL KVVKADADLV KVPVQRKKIK FGKRNAIKSR
301: LHSNQVKETN KESHLSGAKD SSLVLDNDDP SRVSSSMTCE NEAQKDLMSP FADVPTDTTA TNEQSGPHSN TENGEVFLKA CSIWNITKDD NEPLDKSDLT
401: RQESLSAESV EVPACKDVEA SNGSLDKMDP KVSNLDEKVS NRSTGDKFKY TFCRKRKKEA VSCDDVDCSQ DNTSSKKKCG EKQDGHVEPQ KSCTMTESSR
501: DSRRLAQVAR QLISLSEKKW WQ

Best Arabidopsis Sequence Match ( AT1G74860.1 )
(BLAST)

001: MADPETLAAL KRAYADTILN TTKEAAARVM VSEKKARRYQ QELVTVRNEA LHTLVRLKQM LDSKVKETEM QSLKQQQKVE ELEAQLGEAE DIVGELRLEL
101: RVLHDELKKL TDGQKHLKKN HEENLCWNNR DAAVSVMPEV SCSHENTEAV GFCIPVEQNG SVVANGIKVP SLTRINSINR CSYKDNKDQC HYTLPSILTK
201: RRETEGLAQM IHTVDSSMAN GVLSSSVEVG DVNDGVCLHE VSSCKIVESL EMSGCADATD SISSVKDGEA PIVSPNSSQK DVGTLISLKT SPPREHENDR
301: KLEISETEAR KEEKESCENM EVSASPLCEE TPVLALSKNR CIKYTFKRKR KKEVLSNLEG DSSFEESRNM KQKTVEKDDG YLESLKPSFT SESSRDVVYA

Arabidopsis Description

At1g74860 [Source:UniProtKB/TrEMBL;Acc:Q9SSG6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.