Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d016980_P001 | Maize | nucleus | 80.46 | 78.91 |
| OQU85212 | Sorghum | nucleus | 78.34 | 73.89 |
| Os02t0580700-01 | Rice | nucleus | 46.42 | 48.97 |
| TraesCS6B01G228300.1 | Wheat | nucleus | 43.32 | 45.63 |
| TraesCS6A01G198400.1 | Wheat | nucleus | 43.0 | 45.28 |
| TraesCS6D01G184700.1 | Wheat | nucleus | 43.65 | 44.37 |
| Bra016529.1-P | Field mustard | nucleus | 11.4 | 23.26 |
| CDX96685 | Canola | nucleus | 11.56 | 22.98 |
| AT1G19010.1 | Thale cress | nucleus | 11.73 | 22.57 |
| PGSC0003DMT400062849 | Potato | nucleus | 21.01 | 21.68 |
| Bra015888.1-P | Field mustard | nucleus | 11.89 | 21.66 |
| KRH03382 | Soybean | nucleus | 17.59 | 20.69 |
| GSMUA_Achr3P12880_001 | Banana | nucleus | 19.22 | 20.21 |
| KRH56999 | Soybean | nucleus | 16.61 | 19.5 |
| CDX83796 | Canola | plastid | 11.24 | 19.06 |
| VIT_17s0000g07490.t01 | Wine grape | nucleus | 16.45 | 19.02 |
| Solyc03g113660.2.1 | Tomato | nucleus | 10.59 | 18.57 |
| Solyc07g062420.1.1 | Tomato | nucleus | 6.35 | 18.48 |
| KRH18547 | Soybean | nucleus | 15.8 | 18.1 |
| KRG93451 | Soybean | nucleus | 15.64 | 18.01 |
| CDX83793 | Canola | nucleus | 6.68 | 17.98 |
| CDX73119 | Canola | nucleus | 12.05 | 17.87 |
| PGSC0003DMT400003550 | Potato | nucleus | 15.96 | 17.72 |
| CDY45399 | Canola | nucleus, plastid | 11.56 | 17.62 |
| Solyc02g087450.2.1 | Tomato | nucleus | 15.8 | 17.54 |
| AT1G74860.1 | Thale cress | nucleus | 11.24 | 17.25 |
| GSMUA_Achr3P28160_001 | Banana | nucleus | 19.06 | 17.06 |
| Solyc06g071250.2.1 | Tomato | nucleus | 11.24 | 16.59 |
| GSMUA_Achr9P22660_001 | Banana | nucleus | 19.38 | 16.41 |
| VIT_14s0066g02260.t01 | Wine grape | nucleus | 16.29 | 15.82 |
| CDX86434 | Canola | nucleus | 12.38 | 14.26 |
| Bra025333.1-P | Field mustard | nucleus | 12.38 | 14.26 |
| CDX85195 | Canola | nucleus | 12.21 | 12.69 |
Protein Annotations
| EnsemblPlants:Zm00001d050907_P001 | EnsemblPlants:Zm00001d050907_T001 | EnsemblPlantsGene:Zm00001d050907 | EntrezGene:103653685 | ncoils:Coil | PANTHER:PTHR34778 |
| PANTHER:PTHR34778:SF2 | ProteinID:AQK53218.1 | SEG:seg | UniParc:UPI0002211DF2 | UniProt:K7UG74 | MapMan:35.2 |
Description
No Description!
Coordinates
chr4:+:129650946..129657013
Molecular Weight (calculated)
68077.4 Da
IEP (calculated)
8.252
GRAVY (calculated)
-0.733
Length
614 amino acids
Sequence
(BLAST)
(BLAST)
001: MTDCQVVAMK KAYARIMLNM AQESAARVLT AERRAVALAA SLEAAKEDGV AALLRLKAIM EVRIKEKELE SLVHVKMIKE LEEQLNGSQN AMASLKVELQ
101: RANTELELTR KTLADERMNS LPTSNNVYYS NKNVSPCSKI HPQGGNILLK NKKNADNSDD TCLVLITEEN EAVDKLEDKD RRSPDLPSFM KRNKKPKFCH
201: NGCTQRIHAL KQQTQSTDAF LKQNQKQATA FNSHSKARKK NAAKNSCHTR SVTEQILQTK FLGKFKRKRG RRNRPSYKHD NSSEHGEAEY KLSDRSESDG
301: NGCLLLLQAL EQDLSPPKLS TEHDGEALTD LKEDFEMSGG DAELSRCTAF SELVNVLAVN SVQIKRRKRT KTVRVLEVDF SDTKSVPEPA NTQLRTSSKS
401: MSGNQSVSEM TENRSDTPIR NSSPFLKCAT ANLMHQIAAG NGQFDPEIGS AVSLQSTKSE TTDYGNLVVD QQELITPNNN TTSLKEVNED GSCSLASPKA
501: DASTPVQALE KYDISVGSSL NKEEHTKASC GASIQAEGAR QIKYTFNRRK RKGMSIDSTP QRAVPEESSD LCSPTNKQKL HPDCVEQDHL IDSPQGHSQL
601: VQVAEQLILL SEHM
101: RANTELELTR KTLADERMNS LPTSNNVYYS NKNVSPCSKI HPQGGNILLK NKKNADNSDD TCLVLITEEN EAVDKLEDKD RRSPDLPSFM KRNKKPKFCH
201: NGCTQRIHAL KQQTQSTDAF LKQNQKQATA FNSHSKARKK NAAKNSCHTR SVTEQILQTK FLGKFKRKRG RRNRPSYKHD NSSEHGEAEY KLSDRSESDG
301: NGCLLLLQAL EQDLSPPKLS TEHDGEALTD LKEDFEMSGG DAELSRCTAF SELVNVLAVN SVQIKRRKRT KTVRVLEVDF SDTKSVPEPA NTQLRTSSKS
401: MSGNQSVSEM TENRSDTPIR NSSPFLKCAT ANLMHQIAAG NGQFDPEIGS AVSLQSTKSE TTDYGNLVVD QQELITPNNN TTSLKEVNED GSCSLASPKA
501: DASTPVQALE KYDISVGSSL NKEEHTKASC GASIQAEGAR QIKYTFNRRK RKGMSIDSTP QRAVPEESSD LCSPTNKQKL HPDCVEQDHL IDSPQGHSQL
601: VQVAEQLILL SEHM
001: MTDPEKLTAL KKAYAETILN TAKEAAARVM ITERKARGYQ QELASVRDEA LRACLRLKQI YDSKVKEAEM ISLQKQQKIE ELEAQLGEAE DIVGELRTEL
101: RESRYLLEKL ANGCQTNLSK EEKAPNEAVS LEVREDSSNH ERSVVASVIK PHMSDRDLSI NRCSYKENKD PCLYTLPSIL SRCREAEVVE RNTINGDCAD
201: VESLTEARKE EAKENDIELS TTPLSPSEKQ CIKFSYKRKH NKDGSNSPEG GGSSSQDDDD DDESRSRRHK TGEKDNAYLD SFTSTEPSRD SRRVAQVARQ
301: LLPFSEKKGL QQSQCDDVP
101: RESRYLLEKL ANGCQTNLSK EEKAPNEAVS LEVREDSSNH ERSVVASVIK PHMSDRDLSI NRCSYKENKD PCLYTLPSIL SRCREAEVVE RNTINGDCAD
201: VESLTEARKE EAKENDIELS TTPLSPSEKQ CIKFSYKRKH NKDGSNSPEG GGSSSQDDDD DDESRSRRHK TGEKDNAYLD SFTSTEPSRD SRRVAQVARQ
301: LLPFSEKKGL QQSQCDDVP
Arabidopsis Description
Uncharacterized protein At1g19010 [Source:UniProtKB/TrEMBL;Acc:Q9C5J5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.