Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86434 | Canola | nucleus | 45.52 | 50.47 |
| CDX96685 | Canola | nucleus | 12.01 | 22.98 |
| CDX83796 | Canola | plastid | 12.01 | 19.61 |
| PGSC0003DMT400003550 | Potato | nucleus | 17.77 | 18.99 |
| KRG93451 | Soybean | nucleus | 16.92 | 18.76 |
| CDY45399 | Canola | nucleus, plastid | 12.69 | 18.61 |
| VIT_14s0066g02260.t01 | Wine grape | nucleus | 19.8 | 18.51 |
| Solyc02g087450.2.1 | Tomato | nucleus | 17.26 | 18.44 |
| CDX73119 | Canola | nucleus | 12.69 | 18.12 |
| KRH18547 | Soybean | nucleus | 16.41 | 18.1 |
| Solyc07g062420.1.1 | Tomato | nucleus | 6.26 | 17.54 |
| CDX83793 | Canola | nucleus | 6.6 | 17.11 |
| GSMUA_Achr3P12880_001 | Banana | nucleus | 15.57 | 15.75 |
| Os02t0580700-01 | Rice | nucleus | 13.37 | 13.57 |
| TraesCS6D01G184700.1 | Wheat | nucleus | 13.71 | 13.41 |
| TraesCS6A01G198400.1 | Wheat | nucleus | 13.2 | 13.38 |
| TraesCS6B01G228300.1 | Wheat | nucleus | 13.03 | 13.21 |
| GSMUA_Achr9P22660_001 | Banana | nucleus | 15.4 | 12.55 |
| Zm00001d016980_P001 | Maize | nucleus | 13.2 | 12.46 |
| GSMUA_Achr3P28160_001 | Banana | nucleus | 14.38 | 12.39 |
| Zm00001d050907_P001 | Maize | nucleus | 12.69 | 12.21 |
| OQU85212 | Sorghum | nucleus | 12.86 | 11.67 |
Protein Annotations
| EnsemblPlants:CDX85195 | EnsemblPlantsGene:GSBRNA2T00142812001 | ncoils:Coil | PANTHER:PTHR34778 | PANTHER:PTHR34778:SF2 | ProteinID:CDX85195 |
| ProteinID:CDX85195.1 | SEG:seg | UniParc:UPI0004EAE769 | MapMan:35.2 | : | : |
Description
BnaC07g25060D
Coordinates
chrLK031841:-:200468..202555
Molecular Weight (calculated)
66375.0 Da
IEP (calculated)
4.615
GRAVY (calculated)
-0.823
Length
591 amino acids
Sequence
(BLAST)
(BLAST)
001: MEESHKTTAL KKAYAEIILN TAKESAARVM LSDRKSARFH HDLSETKEEA LRLLVRLKHM IDAKTIEGDV ISSNQQRQID VLEAQLHEAE DIITDLRSEV
101: RWVRDRLEKS KAFESQERNI VNMEEEEETV SVHPDFVAEN EEKQFDGLSV ADTLKAYESQ ERNVVREEEE EMVSVHKVDP EVIVESSNPN QEDCSSLDDV
201: ECEDGESLEK AKASELQQER NLVDMEEEMV SAHKVDPEVV LESVNPNLED HSSLHDAECE NLEKAKAYES QERNLVVNKE EETVSGHKVD QEFVVESLKP
301: DQEVADTCFS HEKHFDGLSV VDTVMGNAVS ESESDGDIRI KKLELSRNGC TQRIHALERI VLDGKSSSSA DEEEQQRTTE KDSEESLSSG KAGTLGNTRC
401: LVLALRASSA EVVTLPSNAL GIKKARKLRG RRKKRFGKPK AKSVRSQSQL IKPCQSQSNA TCSKTSTSDG EDSMETHLTV ESEEVDDLQT CIELKEHLQL
501: KRTLDSDVLV SCEGEEESVV VPSTKMASES KVAALVSDQI SESPPRANVN RLLKYTFQRK RKRGSADDTN NLPRKHQENE AQDQTETTLS K
101: RWVRDRLEKS KAFESQERNI VNMEEEEETV SVHPDFVAEN EEKQFDGLSV ADTLKAYESQ ERNVVREEEE EMVSVHKVDP EVIVESSNPN QEDCSSLDDV
201: ECEDGESLEK AKASELQQER NLVDMEEEMV SAHKVDPEVV LESVNPNLED HSSLHDAECE NLEKAKAYES QERNLVVNKE EETVSGHKVD QEFVVESLKP
301: DQEVADTCFS HEKHFDGLSV VDTVMGNAVS ESESDGDIRI KKLELSRNGC TQRIHALERI VLDGKSSSSA DEEEQQRTTE KDSEESLSSG KAGTLGNTRC
401: LVLALRASSA EVVTLPSNAL GIKKARKLRG RRKKRFGKPK AKSVRSQSQL IKPCQSQSNA TCSKTSTSDG EDSMETHLTV ESEEVDDLQT CIELKEHLQL
501: KRTLDSDVLV SCEGEEESVV VPSTKMASES KVAALVSDQI SESPPRANVN RLLKYTFQRK RKRGSADDTN NLPRKHQENE AQDQTETTLS K
001: MTDPEKLTAL KKAYAETILN TAKEAAARVM ITERKARGYQ QELASVRDEA LRACLRLKQI YDSKVKEAEM ISLQKQQKIE ELEAQLGEAE DIVGELRTEL
101: RESRYLLEKL ANGCQTNLSK EEKAPNEAVS LEVREDSSNH ERSVVASVIK PHMSDRDLSI NRCSYKENKD PCLYTLPSIL SRCREAEVVE RNTINGDCAD
201: VESLTEARKE EAKENDIELS TTPLSPSEKQ CIKFSYKRKH NKDGSNSPEG GGSSSQDDDD DDESRSRRHK TGEKDNAYLD SFTSTEPSRD SRRVAQVARQ
301: LLPFSEKKGL QQSQCDDVP
101: RESRYLLEKL ANGCQTNLSK EEKAPNEAVS LEVREDSSNH ERSVVASVIK PHMSDRDLSI NRCSYKENKD PCLYTLPSIL SRCREAEVVE RNTINGDCAD
201: VESLTEARKE EAKENDIELS TTPLSPSEKQ CIKFSYKRKH NKDGSNSPEG GGSSSQDDDD DDESRSRRHK TGEKDNAYLD SFTSTEPSRD SRRVAQVARQ
301: LLPFSEKKGL QQSQCDDVP
Arabidopsis Description
Uncharacterized protein At1g19010 [Source:UniProtKB/TrEMBL;Acc:Q9C5J5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.