Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX96685 | Canola | nucleus | 98.01 | 95.47 |
| AT1G19010.1 | Thale cress | nucleus | 67.77 | 63.95 |
| Bra015888.1-P | Field mustard | nucleus | 49.5 | 44.21 |
| KRH56999 | Soybean | nucleus | 39.53 | 22.75 |
| KRH03382 | Soybean | nucleus | 38.87 | 22.41 |
| VIT_17s0000g07490.t01 | Wine grape | nucleus | 39.53 | 22.41 |
| Solyc06g071250.2.1 | Tomato | nucleus | 27.24 | 19.71 |
| PGSC0003DMT400062849 | Potato | nucleus | 35.22 | 17.82 |
| GSMUA_Achr3P12880_001 | Banana | nucleus | 28.9 | 14.9 |
| Bra025333.1-P | Field mustard | nucleus | 24.92 | 14.07 |
| GSMUA_Achr3P28160_001 | Banana | nucleus | 29.9 | 13.12 |
| Os02t0580700-01 | Rice | nucleus | 22.92 | 11.86 |
| Zm00001d050907_P001 | Maize | nucleus | 23.26 | 11.4 |
| Zm00001d016980_P001 | Maize | nucleus | 23.59 | 11.34 |
| TraesCS6B01G228300.1 | Wheat | nucleus | 20.93 | 10.81 |
| TraesCS6A01G198400.1 | Wheat | nucleus | 20.6 | 10.63 |
| GSMUA_Achr9P22660_001 | Banana | nucleus | 25.58 | 10.62 |
| TraesCS6D01G184700.1 | Wheat | nucleus | 21.26 | 10.6 |
| OQU85212 | Sorghum | nucleus | 22.59 | 10.45 |
| Solyc03g113660.2.1 | Tomato | nucleus | 11.3 | 9.71 |
Protein Annotations
Description
AT1G19010 (E=2e-078) | unknown protein
Coordinates
chrA08:-:18890968..18892397
Molecular Weight (calculated)
34265.9 Da
IEP (calculated)
5.264
GRAVY (calculated)
-1.015
Length
301 amino acids
Sequence
(BLAST)
(BLAST)
001: MTDPERLTAL KKAYADTILN TAKEAAARVM VSERRARGYQ QELVAVRDEA LRTCLRLKQM YDSKVKEAEM MALSKQQKIE ELEAQLGEAE DIVGELRMEL
101: RESRYQLEKL INSHQSNEEE NKPINEVVSL ACEDSSNHER TVVASGIIKP HSSDRDMSIN RCSYKENKDP CNHTLPSILT RRRDADALEK GDCPNAEEKE
201: LLTTSLSPSE KEYVQFTVKR KRKKDERSGS ISPEGGSSSS QEDDESRNRR QKTGEKDNVY LDSFNTESSS RDSRRVAQVA RQLLPFTEKI LSQENQSDDV
301: S
101: RESRYQLEKL INSHQSNEEE NKPINEVVSL ACEDSSNHER TVVASGIIKP HSSDRDMSIN RCSYKENKDP CNHTLPSILT RRRDADALEK GDCPNAEEKE
201: LLTTSLSPSE KEYVQFTVKR KRKKDERSGS ISPEGGSSSS QEDDESRNRR QKTGEKDNVY LDSFNTESSS RDSRRVAQVA RQLLPFTEKI LSQENQSDDV
301: S
001: MTDPEKLTAL KKAYAETILN TAKEAAARVM ITERKARGYQ QELASVRDEA LRACLRLKQI YDSKVKEAEM ISLQKQQKIE ELEAQLGEAE DIVGELRTEL
101: RESRYLLEKL ANGCQTNLSK EEKAPNEAVS LEVREDSSNH ERSVVASVIK PHMSDRDLSI NRCSYKENKD PCLYTLPSIL SRCREAEVVE RNTINGDCAD
201: VESLTEARKE EAKENDIELS TTPLSPSEKQ CIKFSYKRKH NKDGSNSPEG GGSSSQDDDD DDESRSRRHK TGEKDNAYLD SFTSTEPSRD SRRVAQVARQ
301: LLPFSEKKGL QQSQCDDVP
101: RESRYLLEKL ANGCQTNLSK EEKAPNEAVS LEVREDSSNH ERSVVASVIK PHMSDRDLSI NRCSYKENKD PCLYTLPSIL SRCREAEVVE RNTINGDCAD
201: VESLTEARKE EAKENDIELS TTPLSPSEKQ CIKFSYKRKH NKDGSNSPEG GGSSSQDDDD DDESRSRRHK TGEKDNAYLD SFTSTEPSRD SRRVAQVARQ
301: LLPFSEKKGL QQSQCDDVP
Arabidopsis Description
Uncharacterized protein At1g19010 [Source:UniProtKB/TrEMBL;Acc:Q9C5J5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.