Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX73119 | Canola | nucleus | 88.72 | 72.22 |
| AT1G74860.1 | Thale cress | nucleus | 61.13 | 51.5 |
| Bra016529.1-P | Field mustard | nucleus | 44.21 | 49.5 |
| KRH56999 | Soybean | nucleus | 39.47 | 25.43 |
| KRH03382 | Soybean | nucleus | 38.87 | 25.1 |
| Solyc06g071250.2.1 | Tomato | nucleus | 29.08 | 23.56 |
| VIT_17s0000g07490.t01 | Wine grape | nucleus | 36.5 | 23.16 |
| PGSC0003DMT400062849 | Potato | nucleus | 35.31 | 20.0 |
| Bra025333.1-P | Field mustard | nucleus | 24.04 | 15.2 |
| GSMUA_Achr3P12880_001 | Banana | nucleus | 26.11 | 15.07 |
| GSMUA_Achr3P28160_001 | Banana | nucleus | 29.38 | 14.43 |
| Solyc03g113660.2.1 | Tomato | nucleus | 14.54 | 14.0 |
| GSMUA_Achr9P22660_001 | Banana | nucleus | 28.78 | 13.38 |
| TraesCS6B01G228300.1 | Wheat | nucleus | 22.26 | 12.86 |
| TraesCS6A01G198400.1 | Wheat | nucleus | 21.96 | 12.69 |
| Zm00001d016980_P001 | Maize | nucleus | 23.15 | 12.46 |
| TraesCS6D01G184700.1 | Wheat | nucleus | 22.26 | 12.42 |
| Zm00001d050907_P001 | Maize | nucleus | 21.66 | 11.89 |
| Os02t0580700-01 | Rice | nucleus | 20.47 | 11.86 |
| OQU85212 | Sorghum | nucleus | 22.26 | 11.52 |
Protein Annotations
Description
AT1G74860 (E=3e-075) | unknown protein
Coordinates
chrA07:+:20356305..20357900
Molecular Weight (calculated)
37519.2 Da
IEP (calculated)
7.778
GRAVY (calculated)
-0.807
Length
337 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDSETLAAL KRAYADTILN TTKEAAARVL SSEKKTRMYQ QEIVTVKDEA ITTLLRLKQM YDSKVKETEE MSLKQQQKVE ELEAQLGEAE DIVGELRMEL
101: RALHDELNKV TNGNTSYLKG DHQEVSCRKA SDAAVSSSQE RSGAVPVEQS GSVVANGITN QSLARINSIK RCSSKDSMDR CHHTLPSILT KRREVEGCTQ
201: MIHAVDKKSM VNGDGKDPMV SQNTSPKEHE QNRRTVISAT EARKEEKGIL ASPLCEETPV LAASKNRCIK YTFKRKRKKE ASSNLEGDSS FEESRNVKQK
301: TGEKDDGYLE SLKPSFTGES SRDSLCVAQM ARQVSEY
101: RALHDELNKV TNGNTSYLKG DHQEVSCRKA SDAAVSSSQE RSGAVPVEQS GSVVANGITN QSLARINSIK RCSSKDSMDR CHHTLPSILT KRREVEGCTQ
201: MIHAVDKKSM VNGDGKDPMV SQNTSPKEHE QNRRTVISAT EARKEEKGIL ASPLCEETPV LAASKNRCIK YTFKRKRKKE ASSNLEGDSS FEESRNVKQK
301: TGEKDDGYLE SLKPSFTGES SRDSLCVAQM ARQVSEY
001: MADPETLAAL KRAYADTILN TTKEAAARVM VSEKKARRYQ QELVTVRNEA LHTLVRLKQM LDSKVKETEM QSLKQQQKVE ELEAQLGEAE DIVGELRLEL
101: RVLHDELKKL TDGQKHLKKN HEENLCWNNR DAAVSVMPEV SCSHENTEAV GFCIPVEQNG SVVANGIKVP SLTRINSINR CSYKDNKDQC HYTLPSILTK
201: RRETEGLAQM IHTVDSSMAN GVLSSSVEVG DVNDGVCLHE VSSCKIVESL EMSGCADATD SISSVKDGEA PIVSPNSSQK DVGTLISLKT SPPREHENDR
301: KLEISETEAR KEEKESCENM EVSASPLCEE TPVLALSKNR CIKYTFKRKR KKEVLSNLEG DSSFEESRNM KQKTVEKDDG YLESLKPSFT SESSRDVVYA
101: RVLHDELKKL TDGQKHLKKN HEENLCWNNR DAAVSVMPEV SCSHENTEAV GFCIPVEQNG SVVANGIKVP SLTRINSINR CSYKDNKDQC HYTLPSILTK
201: RRETEGLAQM IHTVDSSMAN GVLSSSVEVG DVNDGVCLHE VSSCKIVESL EMSGCADATD SISSVKDGEA PIVSPNSSQK DVGTLISLKT SPPREHENDR
301: KLEISETEAR KEEKESCENM EVSASPLCEE TPVLALSKNR CIKYTFKRKR KKEVLSNLEG DSSFEESRNM KQKTVEKDDG YLESLKPSFT SESSRDVVYA
Arabidopsis Description
At1g74860 [Source:UniProtKB/TrEMBL;Acc:Q9SSG6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.