CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra012478.1-P	Field mustard	mitochondrion	96.59	96.59
CDY58595	Canola	mitochondrion	96.59	96.59
AT1G25420.1	Thale cress	mitochondrion	87.93	87.93
Zm00001d052541_P001	Maize	extracellular	28.79	64.58
KRG90825	Soybean	mitochondrion	63.47	63.27
KRH35947	Soybean	mitochondrion	61.92	61.73
VIT_01s0011g03610.t01	Wine grape	mitochondrion	61.92	60.79
Solyc04g007230.2.1	Tomato	mitochondrion	57.89	57.89
TraesCS3D01G263400.1	Wheat	mitochondrion, plastid	51.39	52.04
TraesCS3A01G263500.1	Wheat	mitochondrion, plastid	51.39	52.04
TraesCS3B01G296700.1	Wheat	mitochondrion, plastid	51.08	51.72
Os01t0687700-01	Rice	mitochondrion, plasma membrane	50.77	51.41
Zm00001d043813_P001	Maize	mitochondrion	51.08	51.4
KXG33152	Sorghum	mitochondrion	51.08	51.4
KXG19452	Sorghum	mitochondrion	43.65	51.27
GSMUA_Achr3P29510_001	Banana	mitochondrion	50.77	50.31
GSMUA_Achr9P21370_001	Banana	mitochondrion	50.15	49.54
HORVU3Hr1G063860.1	Barley	plastid	50.46	44.9
CDY04642	Canola	cytosol	17.96	38.67
CDX87282	Canola	cytosol	18.89	30.2
CDX75521	Canola	plastid	40.25	30.02
CDX69159	Canola	plastid	40.25	29.55
CDY69937	Canola	plastid	37.77	29.4
CDY41639	Canola	plastid	37.77	28.37
CDY48635	Canola	cytosol	26.93	25.97
CDY46461	Canola	cytosol, mitochondrion, nucleus	43.65	24.91
CDX91784	Canola	nucleus	43.96	24.48
CDY49898	Canola	mitochondrion	19.5	22.99
CDX87900	Canola	mitochondrion	19.2	21.53
CDY49897	Canola	nucleus	17.65	21.27
CDY50176	Canola	mitochondrion	25.7	21.07
CDY21093	Canola	mitochondrion	25.39	20.76
CDX87899	Canola	nucleus	17.65	20.65
CDY19375	Canola	mitochondrion	26.01	20.59
CDY52976	Canola	mitochondrion	19.2	20.06
CDY20110	Canola	nucleus	14.24	19.25
CDY21843	Canola	nucleus	14.55	19.18
CDY41108	Canola	nucleus	21.98	18.78
CDY37561	Canola	nucleus	21.67	18.57
CDX78503	Canola	mitochondrion	19.5	17.9
CDX93076	Canola	mitochondrion	13.31	17.77
CDX70491	Canola	mitochondrion	19.81	16.89
CDX97673	Canola	plastid	13.31	16.67
CDX98558	Canola	plastid	13.0	16.28
CDY33850	Canola	mitochondrion	18.27	16.25
CDY22873	Canola	mitochondrion	17.96	16.2
CDY15051	Canola	cytosol	8.05	14.69
CDY35879	Canola	mitochondrion	34.06	12.0
CDX82713	Canola	mitochondrion	33.44	11.75
CDY43502	Canola	mitochondrion	32.51	11.23
CDX75238	Canola	nucleus	17.34	8.87
CDX68838	Canola	nucleus	17.03	8.73

Protein Annotations

EnsemblPlants:CDY53122	EnsemblPlantsGene:GSBRNA2T00008635001	Gene3D:1.20.1260.60	GO:GO:0006810	GO:GO:0008150	GO:GO:0015031
InterPro:Ist1	PANTHER:PTHR12161	PANTHER:PTHR12161:SF28	PFAM:PF03398	ProteinID:CDY53122	ProteinID:CDY53122.1
SEG:seg	UniParc:UPI0004EE1DBD	UniProt:A0A078IT05	MapMan:35.2	:	:

Description

BnaCnng24500DBnaCnng24500D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IT05]

Coordinates

chrLK033166:+:63722..65921

Molecular Weight (calculated)

35953.3 Da

IEP (calculated)

8.904

GRAVY (calculated)

-0.354

Length

323 amino acids

Sequence
(BLAST)

001: MSLLNQLFNR GVFGAKCKTS LNFAIARMKL LQNKRDMHLK HMKQEIAQFL QAGQEPIARI RVEHVIREMN LWAAYEILEL FCEFVLARVP ILESQKECPR
101: ELREAIASII FAAPRCSEVP DLLQLKNLFG TKYGKEFIMV SSELRPDSGV NRTIIEKLSP ASPSGETRLK VLKEIAKEYS LNWDSSATEA EFMKSHEDLL
201: GGAKQIHRQD SVSESRPSQQ GHTQSLVSRE PEVLPAEATQ RLQKLQAQNP VSKNMSSSPK LHVATQAPPD TRRDQSDIME RAQAAIASAD HATAAARAAA
301: QLVNVSYWAA PAVAAEGKPS NLM

Best Arabidopsis Sequence Match ( AT1G25420.1 )
(BLAST)

001: MSLLNQLFNR GIFGAKCKTS LNLAIARMKL LQNKRDMQLK HMKKEIAHFL QAGQEPIARI RVEHVIREMN LWAAYEILEL FCEFILARVP ILESEKECPR
101: ELREAIASII FAAPRCSEVP DLLQIKNLFG TKYGKEFIMV ASELRPDSGV NRTIIEKLSP TSPSGAARLK MLKEIAQEYS LNWDSSATEA EFMKSHEDLL
201: GGAKQIHRQD GISESRPSQQ GYGQSSVSRE VESLPAEATQ RFQKLQAQNP VSKSMPSSKL TSAFQAPPDT RRNQTDVMEI ARAALASADR ATAAARAAAQ
301: LVNVSYGATT PTVAAEGKPL NLM

Arabidopsis Description

At1g25420/F2J7_16 [Source:UniProtKB/TrEMBL;Acc:Q9C6L2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.