CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
mitochondrion 4
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039012.1-P	Field mustard	mitochondrion	100.0	100.0
CDX82713	Canola	mitochondrion	94.11	93.91
CDY04642	Canola	cytosol	12.1	74.0
AT2G19710.1	Thale cress	mitochondrion, nucleus	74.15	72.57
Zm00001d028142_P001	Maize	cytosol	6.54	60.0
Zm00001d048482_P001	Maize	cytosol, mitochondrion, nucleus, plastid	6.43	59.0
CDY43502	Canola	mitochondrion	50.49	49.52
CDY53122	Canola	mitochondrion	12.0	34.06
CDY58595	Canola	mitochondrion	12.0	34.06
CDY69937	Canola	plastid	15.27	33.73
CDX75521	Canola	plastid	15.81	33.49
CDX69159	Canola	plastid	15.7	32.73
CDY41639	Canola	plastid	15.27	32.56
KRH60150	Soybean	cytosol, mitochondrion, nucleus, plastid	19.74	31.15
CDY46461	Canola	cytosol, mitochondrion, nucleus	17.34	28.09
CDX91784	Canola	nucleus	17.34	27.41
KRH49036	Soybean	mitochondrion	29.66	25.83
CDY21093	Canola	mitochondrion	11.01	25.57
KRH74171	Soybean	mitochondrion	29.55	25.47
CDX87282	Canola	cytosol	5.56	25.25
CDY50176	Canola	mitochondrion	10.8	25.13
KRH41442	Soybean	cytosol	12.21	25.11
CDY19375	Canola	mitochondrion	11.01	24.75
CDY48635	Canola	cytosol	8.83	24.18
TraesCS3B01G284600.1	Wheat	nucleus	27.48	22.68
TraesCS3D01G253500.1	Wheat	nucleus	27.37	22.47
Os01t0706400-01	Rice	plasma membrane	26.94	22.43
TraesCS3A01G252800.1	Wheat	cytosol	27.15	22.27
CDY21843	Canola	nucleus	5.89	22.04
CDY20110	Canola	nucleus	5.67	21.76
CDX87899	Canola	nucleus	6.54	21.74
TraesCS3B01G288900.2	Wheat	plastid	27.26	21.7
CDY49897	Canola	nucleus	6.32	21.64
HORVU3Hr1G066420.1	Barley	nucleus	27.7	21.47
CDY52976	Canola	mitochondrion	7.09	21.04
Zm00001d011684_P002	Maize	nucleus, plastid	27.37	20.73
CDY22873	Canola	mitochondrion	8.07	20.67
PGSC0003DMT400030456	Potato	mitochondrion, nucleus, plastid	24.1	20.37
EES03498	Sorghum	nucleus, plastid	27.26	20.21
CDX78503	Canola	mitochondrion	7.74	20.17
Solyc07g032230.2.1	Tomato	nucleus	23.56	20.13
CDY33850	Canola	mitochondrion	7.96	20.11
GSMUA_Achr1P14380_001	Banana	nucleus	26.83	19.76
CDY49898	Canola	mitochondrion	5.89	19.71
CDX98558	Canola	plastid	5.45	19.38
CDX93076	Canola	mitochondrion	5.02	19.01
CDX97673	Canola	plastid	5.34	18.99
CDX87900	Canola	mitochondrion	5.89	18.75
CDX70491	Canola	mitochondrion	7.74	18.73
CDY15051	Canola	cytosol	3.49	18.08
CDY37561	Canola	nucleus	7.31	17.77
CDY41108	Canola	nucleus	7.31	17.72
VIT_11s0016g02580.t01	Wine grape	mitochondrion	19.63	15.27
CDX75238	Canola	nucleus	8.4	12.2
CDX68838	Canola	nucleus	8.29	12.06

Protein Annotations

EnsemblPlants:CDY35879	EnsemblPlantsGene:GSBRNA2T00059418001	Gene3D:1.20.1260.60	GO:GO:0006810	GO:GO:0008150	GO:GO:0015031
InterPro:Ist1	ncoils:Coil	PANTHER:PTHR12161	PANTHER:PTHR12161:SF13	PFAM:PF03398	ProteinID:CDY35879
ProteinID:CDY35879.1	SEG:seg	UniParc:UPI0002541008	UniProt:A0A078HEL6	MapMan:35.2	:

Description

BnaA07g01080DBnaA07g01080D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HEL6]

Coordinates

chrLK032363:+:101767..105255

Molecular Weight (calculated)

102739.0 Da

IEP (calculated)

6.881

GRAVY (calculated)

-1.093

Length

917 amino acids

Sequence
(BLAST)

001: MKKVLHRGFK PAKCKTALQM ANSRLKILKN KKEIQIKQLR RELAQLLEAG NTPTARIRVE HVVREEKTVA AYELIGIYCE LIVVRLGVIE SQKNCPIDLK
101: EAVASVLFAS QRLSDVPELS EIVKQFTTKY GKDFATSAIE LRPDSGVSRL LVDKLSVKAP DGPTKVKILT EIAEEHNVVW EAQSFVEPDP RDKFLSGASS
201: FQSASSVNVV DSSRIPNKEQ YSSVQAPAPV NVQHGASERN SYYASDGRSS SRSDNVTSGT ADDYHHPNAR PSRSRPDEGE CRNPNHGESK QRWETEFVDS
301: TDAARAAAEA AERASFAARA AAELSSKERM TRQNSTESHM SSASVNFRNE PSHRRDRSNV SEDHSSPRHN VRMQYQDMNR TQQDRYGRGK EPENPPAVQP
401: SERHYLNNNS RKSGSFGREK QPSEDKTDLN VGYSEDVQFK KQSSRASSHS HSSNYSDEHV IDSDYMKSPK AVEENIFATE YDRQSQSSFK DKDLHDHGHD
501: DAGTFDDYSS FFDKPKFDAE DDEYDHGVGF SLLGSKAPSL TPTPAASWSF KSDHSKSHGN HSSSSQVFQE SPLFDDVPAS PPAFYHEPDR HAKFDNYDPN
601: SESEDDQPRH RGKVDETVNL TSHRSQKFEV SDPVGREFCP VETDEHKDDS RTREESDSEA DALTGLSFKP LVGGFRNKKT LPPYRMSLAR NETSSKSGKE
701: HNGTDDAGKS VSTPRSSRKA SISEKRPSSI PPQPSSSDDD DSEIQLRSRR PETKPQTSYR DSRFSHDDPE EELPGQAFVR SQEKTHKPTT RVRDQNRSNF
801: KIPASAWYED DEEEVERVSA KPVKITGVSL RTKGQVKAHE KRSFPVTPTR TNQESHDQPS PKSTSGQKTV SSSVPPTVKS PDPETPSRER ASHVHPNLPD
901: CDDIFARLGA LRTPNRR

Best Arabidopsis Sequence Match ( AT2G19710.1 )
(BLAST)

001: MKKVLQRGFK PAKCKTALQM ANSRLKILKN KKEIQIKQLR RELAQLLESG QTPTARIRVE HVVREEKTVA AYELIGIYCE LLVVRLGVIE SQKNCPIDLK
101: EAVTSVLFAS QRLSDVPELS EIFKQFTTKY GKDFSTSAVE LRPDSGVSRL LVEKLSAKAP DGPTKVKILM AIAEEHNVVW EAQSFVESDP KDTELLNGAN
201: SFQPASSMNM DSSINSNKEQ PPNIHAPATV NAHHGSSERH HSPENSYANG GRSSSRSNNV TSGKADDYYH SKARPSRSRP DEGECRNPNH GYENSSSRNK
301: QKWEPEFVDS TDAARAAAEA AERASFAARA AAELSNKERM TRQDSTQSHI SSASVNLRNE PSHRRDRSNA QRESFSEDHV SPRRNVRMQY EDMDRTRQDR
401: YDRAEQIPPV DQPSGRHSVD NSRNNGSFGR EKQPSQDETD INVGYSEDVH LRKQSSRVSS HSHSSNYSDE NDLGSDFMKS PSIVEENIFA TEYDHQSQSS
501: FKDIDSHDHG HDDDAAATDN YDDYSSFFYQ PKFHAEDNHY QDEIDHGVGF SLLGSKTSAS AASWSFKGDH SKSHGKHSSS SSQVFQENPS SRLFDDVSTS
601: PPASYHEPDP HAKFDNYGPN SESDGDQPID KVSGDVHERG NLTSDRSHKF KVSDSAGHEV FPLDTEEHTD NSRTREESDS DSEPQLGLRL GALAGGFRNK
701: KTLPPYRMSS ASSKAEKEYI QIDDFGQSSR KDLYSKKASN TETRPSFMPP HPSSSDEDDS DMQHPGRTET KSDSLYSHSR VNHDDSEEEK LPTRSSSRIQ
801: ERSHKPSTGI RVQKRTNFKM PVSASSEDEE EVEREAARIN AKPNKTTGYG FSLRTKGQSK ANEKHSLPVT TKKTDKESHD QPSPRTVTSS HVPQTVKSPD
901: PDTPSRERER ASHVHPNLPE YDDIFARLGA LRAPSRR

Arabidopsis Description

Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:F4ITF9]
SUBAcon: [nucleus,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.