Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G284600.1 | Wheat | nucleus | 92.67 | 93.25 |
| TraesCS3D01G253500.1 | Wheat | nucleus | 93.11 | 93.2 |
| TraesCS3B01G288900.2 | Wheat | plastid | 93.56 | 90.8 |
| HORVU3Hr1G066420.1 | Barley | nucleus | 88.82 | 83.94 |
| Zm00001d028142_P001 | Maize | cytosol | 6.98 | 78.0 |
| Zm00001d048482_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 6.89 | 77.0 |
| Os01t0706400-01 | Rice | plasma membrane | 61.27 | 62.22 |
| EES03498 | Sorghum | nucleus, plastid | 56.35 | 50.93 |
| CDY04642 | Canola | cytosol | 6.8 | 50.67 |
| Zm00001d011684_P002 | Maize | nucleus, plastid | 54.38 | 50.21 |
| TraesCS3A01G263500.1 | Wheat | mitochondrion, plastid | 10.11 | 35.42 |
| TraesCS3A01G459100.1 | Wheat | cytosol, plastid | 14.67 | 31.91 |
| KRH60150 | Soybean | cytosol, mitochondrion, nucleus, plastid | 16.1 | 30.98 |
| TraesCS5A01G346800.1 | Wheat | plastid | 13.06 | 30.1 |
| TraesCS4A01G084900.2 | Wheat | mitochondrion | 4.56 | 28.18 |
| CDY35879 | Canola | mitochondrion | 22.27 | 27.15 |
| Bra039012.1-P | Field mustard | mitochondrion | 22.27 | 27.15 |
| CDX82713 | Canola | mitochondrion | 22.18 | 26.99 |
| AT2G19710.1 | Thale cress | mitochondrion, nucleus | 22.27 | 26.57 |
| KRH49036 | Soybean | mitochondrion | 24.6 | 26.12 |
| KRH74171 | Soybean | mitochondrion | 24.6 | 25.85 |
| KRH41442 | Soybean | cytosol | 10.02 | 25.11 |
| Bra011109.1-P | Field mustard | mitochondrion | 20.57 | 25.0 |
| CDY43502 | Canola | mitochondrion | 20.48 | 24.49 |
| PGSC0003DMT400030456 | Potato | mitochondrion, nucleus, plastid | 23.52 | 24.24 |
| Solyc07g032230.2.1 | Tomato | nucleus | 23.08 | 24.04 |
| TraesCS4A01G269300.1 | Wheat | mitochondrion | 7.16 | 22.6 |
| AT4G29440.1 | Thale cress | mitochondrion | 21.82 | 22.39 |
| GSMUA_Achr1P14380_001 | Banana | nucleus | 24.24 | 21.77 |
| TraesCS4A01G084800.1 | Wheat | mitochondrion | 5.19 | 20.57 |
| VIT_11s0016g02580.t01 | Wine grape | mitochondrion | 16.99 | 16.12 |
| TraesCS4A01G085000.1 | Wheat | mitochondrion, plastid | 7.69 | 16.07 |
| TraesCS6A01G133000.1 | Wheat | cytosol, nucleus, plastid | 8.32 | 13.01 |
| TraesCS7A01G445700.1 | Wheat | cytosol, mitochondrion, nucleus | 7.69 | 12.13 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G252800.1 | EnsemblPlantsGene:TraesCS3A01G252800 | Gene3D:1.20.1260.60 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015031 |
| InterPro:Ist1 | ncoils:Coil | PANTHER:PTHR12161 | PANTHER:PTHR12161:SF13 | PFAM:PF03398 | SEG:seg |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3A:-:473713301..473718995
Molecular Weight (calculated)
121903.0 Da
IEP (calculated)
6.096
GRAVY (calculated)
-1.024
Length
1118 amino acids
Sequence
(BLAST)
(BLAST)
0001: MHRSKGKLSG VLSKGFKPDK CKIALKMAMA RIKLLRNKKE VQVRQMRREV AQLXXXXXXX XXXXXVEHVI REEKFMQAYD LIEVYCELIV ARMSIIDSQK
0101: TCPIDLKEAI ASVIFASMRC SDVTELADVR KNFTSKYGKE FATSALEVRP DSGVNRLVIE KLSAGAPDVQ TKTKTLSSIA AEHNIKWEPK AFEEQKQNED
0201: RMYGSTYSGG NIPTSGSSAS SVPTPQPAAA PYSSVQPATP RVPAGPSYES SEAPANRNPH GTANSNASTQ ENRRGSDASV PPSFQHGAAT YSSANIPGSN
0301: NYSNTGSSSV SGPHSQFGST VPDPVSRTEE INRPRERKSS ASGSNWNVEF KDAASAAQAA ADSAEMASIA ARAAAQLASR GNFYADQDTG AYESTAYMND
0401: TTPRKQQAGR LMKDGKSFNE QISGINDPRM ISSNAREDEE RAETNRVSSQ NMSTPYSSQL HSYAPESRTD HDMPTEPHHA HSSEPPYFND SSEPPYFDDS
0501: SEKESNIRRP EDHPFDLHEE RLPDAGFDWH HTKDIGSRQA SFDQESRNNH YSNFSASHGG SSMSWDNQND KAGADSSAVL FDEYDYDVQE ENLLDHFASK
0601: HTEELPTVQG HKGFSSADWS KQPRSESPVD RTTSTLFSRT ETQPSYDLGA NKEDIPLNDT RPPTFDSDGV SSDEETSTDM HILRTHSRGS DYSENKMFNK
0701: NSGVFVPDVN DSIEDHESRP SKQYQNPPGS DVFHKEQNSG GSPRYDYLGA RGNLGRVQSR DYDLSEEETE PHKLEGTSSG MTGANENRPS PFRIPTSATS
0801: DDSDDGDVGL NYGRLTPGLR NKLRQGPQYK ISGDNLLRKQ SLEGAPSSIE ESVHFKENDT SSEQTGSRTT KNSFGANYHS EHLDGRHTVG KPVESRSSMT
0901: RDDLYSGDTG KLSERSGSPI SSPTKTSVRE NSIQEPHLER PGSGVRRESR SRTARTFFDS DESEEELERR RSGQTKLSKA QIQSRRTREV APDTKRDGRA
1001: RVGAQYAVEA ESTPKSPAKA FSNSSTEQRK VAPAYSRVSV QQSLPNPVRI EPPAARGRWQ EDEPDGSSSP ENEGNTETSA ETLKVSTPTA GPAHVHPKLP
1101: TDYDSFAAHF KSLRTNRR
0101: TCPIDLKEAI ASVIFASMRC SDVTELADVR KNFTSKYGKE FATSALEVRP DSGVNRLVIE KLSAGAPDVQ TKTKTLSSIA AEHNIKWEPK AFEEQKQNED
0201: RMYGSTYSGG NIPTSGSSAS SVPTPQPAAA PYSSVQPATP RVPAGPSYES SEAPANRNPH GTANSNASTQ ENRRGSDASV PPSFQHGAAT YSSANIPGSN
0301: NYSNTGSSSV SGPHSQFGST VPDPVSRTEE INRPRERKSS ASGSNWNVEF KDAASAAQAA ADSAEMASIA ARAAAQLASR GNFYADQDTG AYESTAYMND
0401: TTPRKQQAGR LMKDGKSFNE QISGINDPRM ISSNAREDEE RAETNRVSSQ NMSTPYSSQL HSYAPESRTD HDMPTEPHHA HSSEPPYFND SSEPPYFDDS
0501: SEKESNIRRP EDHPFDLHEE RLPDAGFDWH HTKDIGSRQA SFDQESRNNH YSNFSASHGG SSMSWDNQND KAGADSSAVL FDEYDYDVQE ENLLDHFASK
0601: HTEELPTVQG HKGFSSADWS KQPRSESPVD RTTSTLFSRT ETQPSYDLGA NKEDIPLNDT RPPTFDSDGV SSDEETSTDM HILRTHSRGS DYSENKMFNK
0701: NSGVFVPDVN DSIEDHESRP SKQYQNPPGS DVFHKEQNSG GSPRYDYLGA RGNLGRVQSR DYDLSEEETE PHKLEGTSSG MTGANENRPS PFRIPTSATS
0801: DDSDDGDVGL NYGRLTPGLR NKLRQGPQYK ISGDNLLRKQ SLEGAPSSIE ESVHFKENDT SSEQTGSRTT KNSFGANYHS EHLDGRHTVG KPVESRSSMT
0901: RDDLYSGDTG KLSERSGSPI SSPTKTSVRE NSIQEPHLER PGSGVRRESR SRTARTFFDS DESEEELERR RSGQTKLSKA QIQSRRTREV APDTKRDGRA
1001: RVGAQYAVEA ESTPKSPAKA FSNSSTEQRK VAPAYSRVSV QQSLPNPVRI EPPAARGRWQ EDEPDGSSSP ENEGNTETSA ETLKVSTPTA GPAHVHPKLP
1101: TDYDSFAAHF KSLRTNRR
001: MKKVLQRGFK PAKCKTALQM ANSRLKILKN KKEIQIKQLR RELAQLLESG QTPTARIRVE HVVREEKTVA AYELIGIYCE LLVVRLGVIE SQKNCPIDLK
101: EAVTSVLFAS QRLSDVPELS EIFKQFTTKY GKDFSTSAVE LRPDSGVSRL LVEKLSAKAP DGPTKVKILM AIAEEHNVVW EAQSFVESDP KDTELLNGAN
201: SFQPASSMNM DSSINSNKEQ PPNIHAPATV NAHHGSSERH HSPENSYANG GRSSSRSNNV TSGKADDYYH SKARPSRSRP DEGECRNPNH GYENSSSRNK
301: QKWEPEFVDS TDAARAAAEA AERASFAARA AAELSNKERM TRQDSTQSHI SSASVNLRNE PSHRRDRSNA QRESFSEDHV SPRRNVRMQY EDMDRTRQDR
401: YDRAEQIPPV DQPSGRHSVD NSRNNGSFGR EKQPSQDETD INVGYSEDVH LRKQSSRVSS HSHSSNYSDE NDLGSDFMKS PSIVEENIFA TEYDHQSQSS
501: FKDIDSHDHG HDDDAAATDN YDDYSSFFYQ PKFHAEDNHY QDEIDHGVGF SLLGSKTSAS AASWSFKGDH SKSHGKHSSS SSQVFQENPS SRLFDDVSTS
601: PPASYHEPDP HAKFDNYGPN SESDGDQPID KVSGDVHERG NLTSDRSHKF KVSDSAGHEV FPLDTEEHTD NSRTREESDS DSEPQLGLRL GALAGGFRNK
701: KTLPPYRMSS ASSKAEKEYI QIDDFGQSSR KDLYSKKASN TETRPSFMPP HPSSSDEDDS DMQHPGRTET KSDSLYSHSR VNHDDSEEEK LPTRSSSRIQ
801: ERSHKPSTGI RVQKRTNFKM PVSASSEDEE EVEREAARIN AKPNKTTGYG FSLRTKGQSK ANEKHSLPVT TKKTDKESHD QPSPRTVTSS HVPQTVKSPD
901: PDTPSRERER ASHVHPNLPE YDDIFARLGA LRAPSRR
101: EAVTSVLFAS QRLSDVPELS EIFKQFTTKY GKDFSTSAVE LRPDSGVSRL LVEKLSAKAP DGPTKVKILM AIAEEHNVVW EAQSFVESDP KDTELLNGAN
201: SFQPASSMNM DSSINSNKEQ PPNIHAPATV NAHHGSSERH HSPENSYANG GRSSSRSNNV TSGKADDYYH SKARPSRSRP DEGECRNPNH GYENSSSRNK
301: QKWEPEFVDS TDAARAAAEA AERASFAARA AAELSNKERM TRQDSTQSHI SSASVNLRNE PSHRRDRSNA QRESFSEDHV SPRRNVRMQY EDMDRTRQDR
401: YDRAEQIPPV DQPSGRHSVD NSRNNGSFGR EKQPSQDETD INVGYSEDVH LRKQSSRVSS HSHSSNYSDE NDLGSDFMKS PSIVEENIFA TEYDHQSQSS
501: FKDIDSHDHG HDDDAAATDN YDDYSSFFYQ PKFHAEDNHY QDEIDHGVGF SLLGSKTSAS AASWSFKGDH SKSHGKHSSS SSQVFQENPS SRLFDDVSTS
601: PPASYHEPDP HAKFDNYGPN SESDGDQPID KVSGDVHERG NLTSDRSHKF KVSDSAGHEV FPLDTEEHTD NSRTREESDS DSEPQLGLRL GALAGGFRNK
701: KTLPPYRMSS ASSKAEKEYI QIDDFGQSSR KDLYSKKASN TETRPSFMPP HPSSSDEDDS DMQHPGRTET KSDSLYSHSR VNHDDSEEEK LPTRSSSRIQ
801: ERSHKPSTGI RVQKRTNFKM PVSASSEDEE EVEREAARIN AKPNKTTGYG FSLRTKGQSK ANEKHSLPVT TKKTDKESHD QPSPRTVTSS HVPQTVKSPD
901: PDTPSRERER ASHVHPNLPE YDDIFARLGA LRAPSRR
Arabidopsis Description
Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:F4ITF9]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.