Factsheet for TraesCS5A01G346800.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G353300.1	Wheat	mitochondrion	95.05	95.64
TraesCS5B01G347800.1	Wheat	mitochondrion	94.64	94.83
HORVU5Hr1G086370.1	Barley	nucleus, plastid	92.16	81.87
Os09t0547200-01	Rice	mitochondrion	70.93	72.27
EER99304	Sorghum	plastid	70.72	71.46
Zm00001d021453_P002	Maize	plastid	68.66	63.67
VIT_00s1235g00010.t01	Wine grape	mitochondrion	37.94	52.87
VIT_00s0302g00010.t01	Wine grape	endoplasmic reticulum	34.23	45.98
CDY69937	Canola	plastid	38.35	44.82
KRH07948	Soybean	mitochondrion	40.62	44.67
KRH69704	Soybean	mitochondrion	40.21	44.52
Bra010522.1-P	Field mustard	plastid	38.56	44.42
CDX75521	Canola	plastid	38.97	43.65
Bra011633.1-P	Field mustard	mitochondrion, plastid	38.97	43.45
CDY41639	Canola	plastid	38.14	43.02
GSMUA_Achr3P26880_001	Banana	mitochondrion	37.94	42.59
CDX69159	Canola	plastid	38.35	42.27
PGSC0003DMT400003908	Potato	plastid	40.62	40.29
AT4G35730.1	Thale cress	plastid	38.56	40.13
TraesCS3A01G263500.1	Wheat	mitochondrion, plastid	25.98	39.5
Solyc02g083130.2.1	Tomato	plastid	40.0	35.73
TraesCS4A01G084900.2	Wheat	mitochondrion	13.2	35.36
TraesCS3A01G459100.1	Wheat	cytosol, plastid	31.75	29.96
TraesCS4A01G269300.1	Wheat	mitochondrion	18.76	25.71
TraesCS4A01G084800.1	Wheat	mitochondrion	12.78	21.99
TraesCS4A01G085000.1	Wheat	mitochondrion, plastid	18.97	17.2
TraesCS3A01G252800.1	Wheat	cytosol	30.1	13.06
TraesCS6A01G133000.1	Wheat	cytosol, nucleus, plastid	17.73	12.03
TraesCS7A01G445700.1	Wheat	cytosol, mitochondrion, nucleus	15.05	10.3

Protein Annotations

EnsemblPlants:TraesCS5A01G346800.1	EnsemblPlantsGene:TraesCS5A01G346800	Gene3D:1.20.1260.60	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0006810	GO:GO:0008150	GO:GO:0015031	InterPro:Ist1
PANTHER:PTHR12161	PANTHER:PTHR12161:SF19	PFAM:PF03398	SEG:seg	MapMan:35.2	:

Description

No Description!

Coordinates

chr5A:-:549344442..549347621

Molecular Weight (calculated)

53556.5 Da

IEP (calculated)

6.282

GRAVY (calculated)

-0.822

Length

485 amino acids

Sequence
(BLAST)

001: MMMPTGGDSS SPVRALRRLA GSLLAAARLR GSFSASKCKT EARMAAARMK LLRNRREAQV RKMRGDVAAL LRDGREDTAR IRVEHVIREQ NTMAANEIVE
101: LFCELIVTRL PIIAKQKECP ADLKEGICSL IFAAPRCSEL PELTRMRDLF EKKYGKDFVA AAVDLRPNAG VNNLLIEKLS ANKPSGQTKL KVLKDIAKEH
201: QIDWDPSEAE QDLLKPAEEM IQGPSSFGEA SKMPVKTTLS ANFVQPSPSI YSSGYADEYD DNNVRGAKQF KDAASAARAA AESAAQAASA AKAAANLANQ
301: NTHSSDEDDD DDDDEDEDWK TTLHESTHSS RCQSMMSNSS RTSRKENASA FDEMRLRGST GRRLSGSNHM EDKDSDLLQD LGTGRTRRRN SRAASKVHSE
401: IKFDDSEAED GSDAEIQSSL ERRPPRKERY QGNGHREEKE AEDNDDFPEP PKANPGSRVH PNMPLDFETL TARFEALRSS GGKLP

Best Arabidopsis Sequence Match ( AT4G35730.1 )
(BLAST)

001: MTAAEVASAQ TKKLMKFSLS LFRRGFNSSK CKTAAKMAVA RIKLIRNKRL VVVKQMRRDI AVLLQSGQDA TARIRVEHVI REQNIQAANE IIELFCELIV
101: SRLTIITKQK QCPVDLKEGI ASLIFAAPRC SEIPELGDLR DIFAKKYGKD FVSAATDLRP SCGVNRMLID KLSVRNPGGE YKLKIMKEIA KEFQVDWDTT
201: ETEQELLKPQ EESIDGPRKF VSASSLPVNR AAINEPIDPT KAVPRSTSSM SINTHYHDTE SAAEAATELA KQAVAAAQVA SLLATRRDSS NKEFSVSSDH
301: STHQKDSQYM DHHHHHPGSR RQSRDSETSS YYAKPGAENR GMGRRHSYNN PGINESDYEE EYTNTEAEAK ETMRRRHSYN PRSVPPPATS EIKFDESDYY
401: EEETEPDEPS QGRVSSLPPN RAPPQAPQSG ESRQDSSGHQ VHPKLPDYDI LAARFEAIRH SKGPLI

Arabidopsis Description

Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:F4JNS8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.