Factsheet for TraesCS5D01G353300.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
plastid 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G347800.1	Wheat	mitochondrion	97.51	97.11
TraesCS5A01G346800.1	Wheat	plastid	95.64	95.05
HORVU5Hr1G086370.1	Barley	nucleus, plastid	94.19	83.15
Os09t0547200-01	Rice	mitochondrion	71.99	72.9
EER99304	Sorghum	plastid	71.58	71.88
Zm00001d021453_P002	Maize	plastid	69.71	64.24
VIT_00s1235g00010.t01	Wine grape	mitochondrion	38.59	53.45
VIT_00s0302g00010.t01	Wine grape	endoplasmic reticulum	34.85	46.54
KRH07948	Soybean	mitochondrion	41.49	45.35
KRH69704	Soybean	mitochondrion	41.08	45.21
CDY69937	Canola	plastid	38.8	45.06
Bra010522.1-P	Field mustard	plastid	39.0	44.66
CDX75521	Canola	plastid	39.42	43.88
Bra011633.1-P	Field mustard	mitochondrion, plastid	39.42	43.68
CDY41639	Canola	plastid	38.59	43.26
GSMUA_Achr3P26880_001	Banana	mitochondrion	38.17	42.59
CDX69159	Canola	plastid	38.8	42.5
PGSC0003DMT400003908	Potato	plastid	41.29	40.7
AT4G35730.1	Thale cress	plastid	39.0	40.34
TraesCS3D01G263400.1	Wheat	mitochondrion, plastid	26.35	39.81
TraesCS4D01G219500.2	Wheat	mitochondrion	14.11	36.96
Solyc02g083130.2.1	Tomato	plastid	40.46	35.91
TraesCS3D01G451700.1	Wheat	cytosol	31.74	29.88
TraesCS4D01G044800.1	Wheat	mitochondrion	18.88	26.3
TraesCS4D01G044400.1	Wheat	mitochondrion	18.46	25.28
TraesCS4D01G219800.1	Wheat	mitochondrion	12.86	22.06
TraesCS4D01G219400.3	Wheat	mitochondrion, plastid	19.29	17.22
TraesCS3D01G253500.1	Wheat	nucleus	31.95	13.79
TraesCS6D01G122600.1	Wheat	cytosol, nucleus, plastid	17.84	12.03
TraesCS7D01G433700.1	Wheat	cytosol, mitochondrion, nucleus	15.35	10.19

Protein Annotations

EnsemblPlants:TraesCS5D01G353300.1	EnsemblPlantsGene:TraesCS5D01G353300	Gene3D:1.20.1260.60	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0006810	GO:GO:0008150	GO:GO:0015031	InterPro:Ist1
PANTHER:PTHR12161	PANTHER:PTHR12161:SF19	PFAM:PF03398	SEG:seg	MapMan:35.2	:

Description

No Description!

Coordinates

chr5D:-:435484623..435488083

Molecular Weight (calculated)

53198.3 Da

IEP (calculated)

6.456

GRAVY (calculated)

-0.782

Length

482 amino acids

Sequence
(BLAST)

001: MMMPTGGESR SPVRALRRLA GSLLAAARLR GSFSASKCKT EARMAAARMK LLRNRREAQV RKMRGDVAAL LRDGREDTAR IRVEHVIREQ NTMAANEIIE
101: LFCELIVTRL PIIAKQKECP ADLKEGICSL IFAAPRCSEL PELTRMRDLF EKKYGKDFVA AAVDLRPNAG VNNLLIEKLS VNKPSGQTKL KVLKDIAKEH
201: QIDWDPSEAE QDLLKPAEEL IQGPSSFGEA SKMPVKTTLS ANFVQPTPSN YSSGYADEYD DNHVGGAMQF KDAASAARAA AESAAQAASA AKAAASLANQ
301: NAHSSDEDDD DDEDWKTTLH ESTHSSRRQS MMSNSSRTSR KENASTFDEM RLRGSTGRRL SGSNHMEDKD SDLLQDLGTG RTRRRNSRAA SKVHSEIKFD
401: DSEAEDGSDA EIQSSLERRP PRKERYPGNG HHEEKEVEDD DDDFPEPPKA NPGSCVHPNM PLDFETLTAR FEALRSSGGK LP

Best Arabidopsis Sequence Match ( AT4G35730.1 )
(BLAST)

001: MTAAEVASAQ TKKLMKFSLS LFRRGFNSSK CKTAAKMAVA RIKLIRNKRL VVVKQMRRDI AVLLQSGQDA TARIRVEHVI REQNIQAANE IIELFCELIV
101: SRLTIITKQK QCPVDLKEGI ASLIFAAPRC SEIPELGDLR DIFAKKYGKD FVSAATDLRP SCGVNRMLID KLSVRNPGGE YKLKIMKEIA KEFQVDWDTT
201: ETEQELLKPQ EESIDGPRKF VSASSLPVNR AAINEPIDPT KAVPRSTSSM SINTHYHDTE SAAEAATELA KQAVAAAQVA SLLATRRDSS NKEFSVSSDH
301: STHQKDSQYM DHHHHHPGSR RQSRDSETSS YYAKPGAENR GMGRRHSYNN PGINESDYEE EYTNTEAEAK ETMRRRHSYN PRSVPPPATS EIKFDESDYY
401: EEETEPDEPS QGRVSSLPPN RAPPQAPQSG ESRQDSSGHQ VHPKLPDYDI LAARFEAIRH SKGPLI

Arabidopsis Description

Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:F4JNS8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.