Factsheet for TraesCS4D01G044800.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G045100.1	Wheat	mitochondrion	95.38	93.48
TraesCS4A01G269300.1	Wheat	mitochondrion	93.64	91.53
TraesCS4D01G044400.1	Wheat	mitochondrion	86.99	85.51
Os03t0710000-01	Rice	plasma membrane	61.85	60.28
EER93588	Sorghum	mitochondrion	59.54	60.23
Zm00001d033714_P001	Maize	mitochondrion	60.98	60.11
VIT_14s0006g03050.t01	Wine grape	mitochondrion	22.25	49.36
TraesCS4D01G219500.2	Wheat	mitochondrion	23.99	45.11
GSMUA_Achr6P07700_001	Banana	cytosol, mitochondrion, nucleus	42.2	34.27
Solyc02g085830.2.1	Tomato	mitochondrion	20.23	33.65
PGSC0003DMT400032944	Potato	mitochondrion	19.94	33.17
TraesCS4D01G219800.1	Wheat	mitochondrion	26.88	33.1
KRH45249	Soybean	mitochondrion	37.57	32.83
Solyc05g009550.2.1	Tomato	mitochondrion	39.6	32.08
GSMUA_Achr10P...	Banana	mitochondrion	44.22	31.61
KRH75395	Soybean	mitochondrion	36.71	31.51
GSMUA_Achr6P24100_001	Banana	mitochondrion	43.93	31.08
PGSC0003DMT400033769	Potato	mitochondrion	38.15	30.91
CDY21093	Canola	mitochondrion	34.39	30.13
CDY50176	Canola	mitochondrion	34.1	29.95
CDY19375	Canola	mitochondrion	33.81	28.68
VIT_01s0011g03330.t01	Wine grape	mitochondrion	38.44	28.42
AT1G13340.1	Thale cress	mitochondrion	33.53	28.36
TraesCS3D01G263400.1	Wheat	mitochondrion, plastid	24.28	26.33
TraesCS4D01G219400.3	Wheat	mitochondrion, plastid	38.15	24.44
Bra019826.1-P	Field mustard	mitochondrion	34.1	23.89
KRH46919	Soybean	mitochondrion	26.01	21.95
KRH01764	Soybean	mitochondrion	26.3	20.59
TraesCS5D01G353300.1	Wheat	mitochondrion	26.3	18.88
TraesCS3D01G451700.1	Wheat	cytosol	26.01	17.58
Bra016733.1-P	Field mustard	mitochondrion	34.39	15.93
TraesCS6D01G122600.1	Wheat	cytosol, nucleus, plastid	16.76	8.11
TraesCS7D01G433700.1	Wheat	cytosol, mitochondrion, nucleus	15.61	7.44
TraesCS3D01G253500.1	Wheat	nucleus	23.7	7.34

Protein Annotations

EnsemblPlants:TraesCS4D01G044800.1	EnsemblPlantsGene:TraesCS4D01G044800	Gene3D:1.20.1260.60	GO:GO:0006810	GO:GO:0008150	GO:GO:0015031
InterPro:Ist1	PANTHER:PTHR12161	PANTHER:PTHR12161:SF16	PFAM:PF03398	SEG:seg	MapMan:35.2

Description

No Description!

Coordinates

chr4D:-:20434635..20435881

Molecular Weight (calculated)

37732.3 Da

IEP (calculated)

7.236

GRAVY (calculated)

-0.652

Length

346 amino acids

Sequence
(BLAST)

001: MGRTLDVLLG RTTKQTARLK SLLGLATKRI AVVRAHREVR CAQARGDVEQ LLRQGHPDRA LLRAEQVIRE RDTLDVLLLL DAYCALLADR SALLDAHRDC
101: PEELREAAAG LCYAAARCGD LPELQEARAL LAAKFGRGFA SAAAELRAGC GVNAKLVQRL STALPSLESR QMVLLEIGAD KDIPVRLHSD AASYGHEDSA
201: GRSHHGHGHR KKRHDDDDDR RHATPRAEEP EGDKADSKLT FKDVEEAAQA AFESAATAAA AAKAAIELSR AGSGSTDDRH RRNPGRAHAD DEMLHGGEDL
301: ADAKKFGRIG HVRNYSSDAE DLPEERGEEQ DTPRSRPASV RTNRRL

Best Arabidopsis Sequence Match ( AT1G13340.1 )
(BLAST)

001: MGKKLDALLG RSFKTNKFKS LITLALTRLS ILKNQRQARL SQAISDVTEL LKLGQHEHAY HRVDQVVKDQ NTLDVLFFIH GYFTLCLDRI HLFEHNRDCP
101: EELLEAVSGL LFAASRIGEF PELQEIRNVL ISRFGKDLAA RSIELRSNCG VDPKIIQKLS TRPPPKEVRM KALKEIAAEN NIVLKLDQAS TSTEGTTNMQ
201: GTSDVSKTKL TSKDGRGEGY GLSDSVKRGK KKYKDVADAA QAAFESAAHA AEAAQAAVEL SQFSPRGHDS PGNIGGENSF HGSENKESEQ EQEGNDDSSE
301: GEGDVMSESK RSMSDSEDII DVPVMSFRED PVKLLEKDTI IYDSEEETQP SVETITISKS KDEQNRMVGS NRADTRHVDH MVRSIEDPIM RKAGLKGPVS
401: VRTRQVRGY

Arabidopsis Description

Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:Q9FX63]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.