CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 4
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21093	Canola	mitochondrion	78.92	81.52
Bra019826.1-P	Field mustard	mitochondrion	97.55	80.57
CDY50176	Canola	mitochondrion	77.21	79.95
AT1G13340.1	Thale cress	mitochondrion	76.23	76.04
KRH45249	Soybean	mitochondrion	43.63	44.95
KRH75395	Soybean	mitochondrion	44.12	44.66
PGSC0003DMT400033769	Potato	mitochondrion	43.87	41.92
TraesCS4B01G219300.1	Wheat	mitochondrion	18.63	41.3
Solyc05g009550.2.1	Tomato	mitochondrion	42.89	40.98
VIT_01s0011g03330.t01	Wine grape	mitochondrion	46.08	40.17
TraesCS4D01G219500.2	Wheat	mitochondrion	17.65	39.13
HORVU4Hr1G062250.1	Barley	mitochondrion	16.91	37.5
TraesCS4A01G084900.2	Wheat	mitochondrion	16.42	37.02
EER92528	Sorghum	mitochondrion	16.67	36.56
EER93588	Sorghum	mitochondrion	29.66	35.38
Zm00001d034058_P004	Maize	mitochondrion	16.18	34.74
Os03t0257500-01	Rice	mitochondrion	16.42	34.72
Os03t0710000-01	Rice	plasma membrane	30.15	34.65
Zm00001d033714_P001	Maize	mitochondrion	29.66	34.47
TraesCS4B01G044800.1	Wheat	mitochondrion	28.19	34.23
TraesCS4D01G044800.1	Wheat	mitochondrion	28.68	33.81
TraesCS4A01G269300.1	Wheat	mitochondrion	28.68	33.05
TraesCS4D01G044400.1	Wheat	mitochondrion	28.19	32.67
TraesCS4B01G045100.1	Wheat	mitochondrion	28.19	32.58
Zm00001d028457_P001	Maize	mitochondrion	15.93	32.5
GSMUA_Achr6P07700_001	Banana	cytosol, mitochondrion, nucleus	33.33	31.92
Zm00001d034057_P001	Maize	mitochondrion	16.42	29.26
Zm00001d047885_P001	Maize	mitochondrion	17.89	29.2
Zm00001d047886_P001	Maize	mitochondrion	17.89	29.2
TraesCS4B01G219400.1	Wheat	mitochondrion	18.87	29.17
GSMUA_Achr6P24100_001	Banana	mitochondrion	34.8	29.04
Zm00001d047887_P001	Maize	mitochondrion	17.65	28.92
OQU90964	Sorghum	mitochondrion	11.76	28.74
TraesCS4D01G219800.1	Wheat	mitochondrion	19.12	27.76
Zm00001d047884_P001	Maize	cytosol	9.56	27.27
TraesCS4A01G084800.1	Wheat	mitochondrion	18.63	26.95
HORVU4Hr1G062260.2	Barley	plastid	18.38	26.32
CDX87282	Canola	cytosol	12.99	26.24
CDY53122	Canola	mitochondrion	20.59	26.01
CDY58595	Canola	mitochondrion	20.59	26.01
GSMUA_Achr10P...	Banana	mitochondrion	30.64	25.83
CDY04642	Canola	cytosol	9.31	25.33
CDX75521	Canola	plastid	24.02	22.63
CDX69159	Canola	plastid	23.77	22.05
CDX87899	Canola	nucleus	14.46	21.38
CDY49897	Canola	nucleus	13.73	20.9
CDY69937	Canola	plastid	21.08	20.72
Zm00001d028456_P001	Maize	mitochondrion	26.72	20.53
CDY49898	Canola	mitochondrion	13.73	20.44
EER92527	Sorghum	mitochondrion, plastid	26.72	20.34
CDY41639	Canola	plastid	21.32	20.23
CDY20110	Canola	nucleus	11.76	20.08
CDY52976	Canola	mitochondrion	15.2	20.06
CDY21843	Canola	nucleus	12.01	20.0
Os03t0257600-01	Rice	mitochondrion	26.47	20.0
CDX87900	Canola	mitochondrion	13.97	19.79
TraesCS4D01G219400.3	Wheat	mitochondrion, plastid	25.98	19.63
TraesCS4A01G085000.1	Wheat	mitochondrion, plastid	25.74	19.63
TraesCS4B01G219200.1	Wheat	mitochondrion, plastid	25.98	19.56
CDX98558	Canola	plastid	12.25	19.38
HORVU4Hr1G062110.1	Barley	mitochondrion	25.98	19.34
CDX78503	Canola	mitochondrion	16.18	18.75
CDX97673	Canola	plastid	11.76	18.6
CDY22873	Canola	mitochondrion	16.18	18.44
CDY33850	Canola	mitochondrion	15.69	17.63
CDX70491	Canola	mitochondrion	15.93	17.15
CDX93076	Canola	mitochondrion	10.05	16.94
CDY41108	Canola	nucleus	15.2	16.4
CDY37561	Canola	nucleus	14.95	16.18
CDY46461	Canola	cytosol, mitochondrion, nucleus	22.3	16.08
CDY48635	Canola	cytosol	12.99	15.82
CDX91784	Canola	nucleus	22.3	15.69
CDY15051	Canola	cytosol	6.13	14.12
CDX82713	Canola	mitochondrion	25.0	11.1
CDY35879	Canola	mitochondrion	24.75	11.01
CDY43502	Canola	mitochondrion	22.79	9.95
CDX68838	Canola	nucleus	13.97	9.05
CDX75238	Canola	nucleus	13.73	8.87

Protein Annotations

EnsemblPlants:CDY19375	EnsemblPlantsGene:GSBRNA2T00008912001	Gene3D:1.20.1260.60	GO:GO:0006810	GO:GO:0008150	GO:GO:0015031
InterPro:Ist1	PANTHER:PTHR12161	PANTHER:PTHR12161:SF16	PFAM:PF03398	ProteinID:CDY19375	ProteinID:CDY19375.1
SEG:seg	UniParc:UPI0004EE8C4F	UniProt:A0A078FYA3	MapMan:35.2	:	:

Description

BnaC05g08840DBnaC05g08840D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FYA3]

Coordinates

chrLK032095:+:412372..414013

Molecular Weight (calculated)

44873.9 Da

IEP (calculated)

5.395

GRAVY (calculated)

-0.545

Length

408 amino acids

Sequence
(BLAST)

001: MGKKLDALLG RTFKTKKFKA LLNLALTRLS ILKNQRQVRC SQATSDVTEL LKLGQHENAY HRVDQVIKDQ NTLDVLFFIH GYFTLLLDHV HLFEHNRDCP
101: DELLEAVSSL LFAASRIGEF PELQEIRNVL VSRFGKDIAA RPIELRSNCG VNPKIIQKLS TRHPPREARM KVLKEIAAEN NIVLKLEEAS STSTEGQGQS
201: DVSKAKLTSE VGEDEIGEGY GLSDLVKRGK QKYKDVADAA QAAFESAAHA AVAARAAVEL CQFSPCGPDN TGNNGGGSSS SGSGNNKTEQ EANDGGDLSK
301: GEVDVRSESK KSILDPEDTI EDLMSLREDP VKLLEKDDVL YDSEEETKQI AKTNTTTEVK DEESLMDGSD RADTGHADNM VHSVEEPIIR KAILKGPISV
401: RTRQVRGY

Best Arabidopsis Sequence Match ( AT1G13340.1 )
(BLAST)

001: MGKKLDALLG RSFKTNKFKS LITLALTRLS ILKNQRQARL SQAISDVTEL LKLGQHEHAY HRVDQVVKDQ NTLDVLFFIH GYFTLCLDRI HLFEHNRDCP
101: EELLEAVSGL LFAASRIGEF PELQEIRNVL ISRFGKDLAA RSIELRSNCG VDPKIIQKLS TRPPPKEVRM KALKEIAAEN NIVLKLDQAS TSTEGTTNMQ
201: GTSDVSKTKL TSKDGRGEGY GLSDSVKRGK KKYKDVADAA QAAFESAAHA AEAAQAAVEL SQFSPRGHDS PGNIGGENSF HGSENKESEQ EQEGNDDSSE
301: GEGDVMSESK RSMSDSEDII DVPVMSFRED PVKLLEKDTI IYDSEEETQP SVETITISKS KDEQNRMVGS NRADTRHVDH MVRSIEDPIM RKAGLKGPVS
401: VRTRQVRGY

Arabidopsis Description

Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:Q9FX63]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.