Factsheet for GSMUA_Achr10P11290_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0006g03050.t01	Wine grape	mitochondrion	19.63	60.9
GSMUA_Achr6P24100_001	Banana	mitochondrion	60.54	59.92
GSMUA_Achr6P07700_001	Banana	cytosol, mitochondrion, nucleus	50.62	57.51
TraesCS4D01G219500.2	Wheat	mitochondrion	18.18	47.83
Os03t0710000-01	Rice	plasma membrane	34.92	47.61
EER93588	Sorghum	mitochondrion	33.06	46.78
Zm00001d033714_P001	Maize	mitochondrion	33.26	45.87
PGSC0003DMT400032944	Potato	mitochondrion	19.63	45.67
TraesCS4B01G219300.1	Wheat	mitochondrion	17.36	45.65
TraesCS4A01G084900.2	Wheat	mitochondrion	16.94	45.3
Solyc02g085830.2.1	Tomato	mitochondrion	19.42	45.19
HORVU4Hr1G062250.1	Barley	mitochondrion	17.15	45.11
TraesCS4D01G044800.1	Wheat	mitochondrion	31.61	44.22
EER92528	Sorghum	mitochondrion	16.53	43.01
Os03t0257500-01	Rice	mitochondrion	17.15	43.01
TraesCS4A01G269300.1	Wheat	mitochondrion	31.41	42.94
TraesCS4B01G045100.1	Wheat	mitochondrion	31.2	42.78
TraesCS4B01G044800.1	Wheat	mitochondrion	29.55	42.56
TraesCS4D01G044400.1	Wheat	mitochondrion	30.37	41.76
Zm00001d034058_P004	Maize	mitochondrion	16.32	41.58
Zm00001d028457_P001	Maize	mitochondrion	16.32	39.5
Solyc05g009550.2.1	Tomato	mitochondrion	33.06	37.47
PGSC0003DMT400033769	Potato	mitochondrion	32.85	37.24
KRH45249	Soybean	mitochondrion	30.37	37.12
KRH75395	Soybean	mitochondrion	30.37	36.48
TraesCS4B01G219400.1	Wheat	mitochondrion	19.21	35.23
Zm00001d034057_P001	Maize	mitochondrion	16.12	34.06
CDY21093	Canola	mitochondrion	27.27	33.42
CDY50176	Canola	mitochondrion	27.07	33.25
VIT_01s0011g03330.t01	Wine grape	mitochondrion	31.82	32.91
TraesCS4D01G219800.1	Wheat	mitochondrion	19.01	32.74
HORVU4Hr1G062260.2	Barley	plastid	19.21	32.63
Zm00001d047887_P001	Maize	mitochondrion	16.74	32.53
Zm00001d047886_P001	Maize	mitochondrion	16.74	32.4
Zm00001d047885_P001	Maize	mitochondrion	16.74	32.4
TraesCS4A01G084800.1	Wheat	mitochondrion	18.59	31.91
CDY19375	Canola	mitochondrion	25.83	30.64
AT1G13340.1	Thale cress	mitochondrion	25.62	30.32
OQU90964	Sorghum	mitochondrion	10.33	29.94
GSMUA_Achr3P29510_001	Banana	mitochondrion	19.21	28.53
GSMUA_Achr5P23530_001	Banana	nucleus	10.33	27.93
KRH46919	Soybean	mitochondrion	23.55	27.8
GSMUA_Achr9P21370_001	Banana	mitochondrion	18.39	27.22
EER92527	Sorghum	mitochondrion, plastid	28.93	26.12
KRH01764	Soybean	mitochondrion	23.76	26.02
Bra019826.1-P	Field mustard	mitochondrion	26.45	25.91
Zm00001d028456_P001	Maize	mitochondrion	27.48	25.05
TraesCS4A01G085000.1	Wheat	mitochondrion, plastid	27.69	25.05
HORVU4Hr1G062110.1	Barley	mitochondrion	27.89	24.64
TraesCS4D01G219400.3	Wheat	mitochondrion, plastid	27.48	24.63
Os03t0257600-01	Rice	mitochondrion	27.27	24.44
TraesCS4B01G219200.1	Wheat	mitochondrion, plastid	26.24	23.43
Zm00001d047884_P001	Maize	cytosol	6.61	22.38
GSMUA_Achr3P26880_001	Banana	mitochondrion	19.42	21.76
GSMUA_Achr5P23420_001	Banana	mitochondrion	21.28	21.02
GSMUA_Achr6P02830_001	Banana	cytosol	23.35	19.22
Bra016733.1-P	Field mustard	mitochondrion	27.07	17.54
GSMUA_Achr6P29590_001	Banana	cytosol	11.98	12.66
GSMUA_Achr9P11280_001	Banana	cytosol, mitochondrion, nucleus, plastid	13.02	9.36
GSMUA_Achr8P15690_001	Banana	mitochondrion	12.81	9.25
GSMUA_Achr1P14380_001	Banana	nucleus	21.49	8.35

Protein Annotations

EnsemblPlants:GSMUA_Achr10P11290_001	EnsemblPlants:GSMUA_Achr10T11290_001	EnsemblPlantsGene:GSMUA_Achr10G11290_001	Gene3D:1.20.1260.60	GO:GO:0006810	GO:GO:0008150
GO:GO:0015031	InterPro:Ist1	PANTHER:PTHR12161	PANTHER:PTHR12161:SF16	PFAM:PF03398	SEG:seg
UniParc:UPI000295C0B4	UniProt:M0RHA5	MapMan:35.2	:	:	:

Description

DUF292 domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G11290_001]

Coordinates

chr10:-:20812366..20814124

Molecular Weight (calculated)

54019.4 Da

IEP (calculated)

6.788

GRAVY (calculated)

-0.692

Length

484 amino acids

Sequence
(BLAST)

001: MGRKLDVLLG RRSSRQMPML KSLLSLTVCR LAVLRNRRQA RCDQAREDVA QLLQLGHVDS ALLRVEYVIK EQNMLDAFAM VEHYCHLLGE RAVLLDHREC
101: PEELREAIAS LIFAASRCAE LPELHEVRGI FSSKYGKEFV CAALELRNDC CVNAKMIQKL STAQPSLEIR QRVTKEIAAE KGHKLGCYDP SSDVAEVRYM
201: NSLIQGEPVV KPPVDFIRDQ FLPDENLWPR SHSHHKYNDA AGAAQAAFES AAYAAAAARA AVELCRSESQ GKGSDDENNA GSHKTSAIKE AKTAKAETSA
301: GAYGSDAEEG TKAKQKDLLR EERFREKCIK QQRRISSSSS DSSDEEDNMS WNAQHSTGIN IKNILFDESG HEIGRNETGR GGSLARRTLY VGNEQPSRRG
401: NNGHEGSEQR QFAASLEDEH GEEYDLLPPA YRRGKEIRSG EKYINSLHEE TNKVGLRSGT SGNNAMYNNA ENAYLDSVEL RRLY

Best Arabidopsis Sequence Match ( AT1G13340.1 )
(BLAST)

001: MGKKLDALLG RSFKTNKFKS LITLALTRLS ILKNQRQARL SQAISDVTEL LKLGQHEHAY HRVDQVVKDQ NTLDVLFFIH GYFTLCLDRI HLFEHNRDCP
101: EELLEAVSGL LFAASRIGEF PELQEIRNVL ISRFGKDLAA RSIELRSNCG VDPKIIQKLS TRPPPKEVRM KALKEIAAEN NIVLKLDQAS TSTEGTTNMQ
201: GTSDVSKTKL TSKDGRGEGY GLSDSVKRGK KKYKDVADAA QAAFESAAHA AEAAQAAVEL SQFSPRGHDS PGNIGGENSF HGSENKESEQ EQEGNDDSSE
301: GEGDVMSESK RSMSDSEDII DVPVMSFRED PVKLLEKDTI IYDSEEETQP SVETITISKS KDEQNRMVGS NRADTRHVDH MVRSIEDPIM RKAGLKGPVS
401: VRTRQVRGY

Arabidopsis Description

Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:Q9FX63]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.