Factsheet for Zm00001d034058_P004

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034057_P001	Maize	mitochondrion	94.74	78.6
OQU90964	Sorghum	mitochondrion	60.0	68.26
Zm00001d028457_P001	Maize	mitochondrion	71.58	68.0
Os03t0257500-01	Rice	mitochondrion	66.84	65.8
HORVU4Hr1G062250.1	Barley	mitochondrion	63.16	65.22
TraesCS4D01G219500.2	Wheat	mitochondrion	62.63	64.67
TraesCS4A01G084900.2	Wheat	mitochondrion	61.05	64.09
TraesCS4B01G219300.1	Wheat	mitochondrion	61.58	63.59
Zm00001d047886_P001	Maize	mitochondrion	72.11	54.8
Zm00001d047887_P001	Maize	mitochondrion	71.58	54.62
Zm00001d047885_P001	Maize	mitochondrion	71.05	54.0
TraesCS4B01G219400.1	Wheat	mitochondrion	71.05	51.14
TraesCS4D01G219800.1	Wheat	mitochondrion	71.58	48.4
TraesCS4A01G084800.1	Wheat	mitochondrion	71.05	47.87
HORVU4Hr1G062260.2	Barley	plastid	71.58	47.72
Zm00001d047884_P001	Maize	cytosol	29.47	39.16
VIT_14s0006g03050.t01	Wine grape	mitochondrion	31.58	38.46
Solyc02g085830.2.1	Tomato	mitochondrion	30.53	27.88
Zm00001d052541_P001	Maize	extracellular	21.05	27.78
PGSC0003DMT400032944	Potato	mitochondrion	30.0	27.4
Zm00001d028142_P001	Maize	cytosol	12.63	24.0
Zm00001d033714_P001	Maize	mitochondrion	43.68	23.65
Zm00001d048482_P001	Maize	cytosol, mitochondrion, nucleus, plastid	12.11	23.0
Zm00001d028456_P001	Maize	mitochondrion	60.0	21.47
Zm00001d043813_P001	Maize	mitochondrion	31.58	18.69
GSMUA_Achr6P07700_001	Banana	cytosol, mitochondrion, nucleus	40.53	18.08
KRH46919	Soybean	mitochondrion	38.95	18.05
Solyc05g009550.2.1	Tomato	mitochondrion	40.0	17.8
KRH45249	Soybean	mitochondrion	36.84	17.68
KRH75395	Soybean	mitochondrion	37.37	17.62
PGSC0003DMT400033769	Potato	mitochondrion	39.47	17.56
GSMUA_Achr6P24100_001	Banana	mitochondrion	44.21	17.18
KRH01764	Soybean	mitochondrion	39.47	16.97
CDY21093	Canola	mitochondrion	35.26	16.96
CDY50176	Canola	mitochondrion	34.74	16.75
GSMUA_Achr10P...	Banana	mitochondrion	41.58	16.32
CDY19375	Canola	mitochondrion	34.74	16.18
AT1G13340.1	Thale cress	mitochondrion	34.21	15.89
VIT_01s0011g03330.t01	Wine grape	mitochondrion	35.26	14.32
Bra019826.1-P	Field mustard	mitochondrion	34.21	13.16
Zm00001d021453_P002	Maize	plastid	31.05	11.28
Zm00001d049479_P003	Maize	cytosol, mitochondrion, plastid	29.47	10.26
Zm00001d024425_P003	Maize	cytosol	28.95	9.7
Bra016733.1-P	Field mustard	mitochondrion	35.26	8.97
Zm00001d053852_P001	Maize	nucleus	27.37	7.59
Zm00001d014521_P001	Maize	mitochondrion	24.74	6.1
Zm00001d011684_P002	Maize	nucleus, plastid	26.84	4.21
Zm00001d036913_P001	Maize	cytosol	12.63	3.93
Zm00001d051744_P001	Maize	nucleus	1.58	0.6

Protein Annotations

EnsemblPlants:Zm00001d034058_P004	EnsemblPlants:Zm00001d034058_T004	EnsemblPlantsGene:Zm00001d034058	EntrezGene:103644023	Gene3D:1.20.1260.60	GO:GO:0006810
GO:GO:0008150	GO:GO:0015031	InterPro:Ist1	PANTHER:PTHR12161	PANTHER:PTHR12161:SF26	PFAM:PF03398
ProteinID:ONM09465.1	ProteinID:ONM09466.1	ProteinID:ONM09467.1	ProteinID:ONM09469.1	SEG:seg	UniParc:UPI0002215D8D
UniProt:A0A1D6L546	MapMan:35.2	:	:	:	:

Description

Regulator of Vps4 activity in the MVB pathway protein

Coordinates

chr1:+:282687133..282721026

Molecular Weight (calculated)

21493.4 Da

IEP (calculated)

7.869

GRAVY (calculated)

-0.163

Length

190 amino acids

Sequence
(BLAST)

001: MGFFQGKTSK QTTRVKKLLG LALSRLAIAR RPRLARRSIC RNDVGQLLSL GYLHRALLRA EQVIEEDNML QAFDIIELCC KRLVEHATHL DKPRECGEEI
101: REAAAGIMFA ARWCGDLPEL QVARTILEDK FGSDMAMIAK EGTDIVDPML VWKLSGDKTN MELKKKVTKE IAVENSFMVD FSELQLQEAV

Best Arabidopsis Sequence Match ( AT1G13340.1 )
(BLAST)

001: MGKKLDALLG RSFKTNKFKS LITLALTRLS ILKNQRQARL SQAISDVTEL LKLGQHEHAY HRVDQVVKDQ NTLDVLFFIH GYFTLCLDRI HLFEHNRDCP
101: EELLEAVSGL LFAASRIGEF PELQEIRNVL ISRFGKDLAA RSIELRSNCG VDPKIIQKLS TRPPPKEVRM KALKEIAAEN NIVLKLDQAS TSTEGTTNMQ
201: GTSDVSKTKL TSKDGRGEGY GLSDSVKRGK KKYKDVADAA QAAFESAAHA AEAAQAAVEL SQFSPRGHDS PGNIGGENSF HGSENKESEQ EQEGNDDSSE
301: GEGDVMSESK RSMSDSEDII DVPVMSFRED PVKLLEKDTI IYDSEEETQP SVETITISKS KDEQNRMVGS NRADTRHVDH MVRSIEDPIM RKAGLKGPVS
401: VRTRQVRGY

Arabidopsis Description

Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:Q9FX63]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.