Factsheet for TraesCS4B01G219300.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G219500.2	Wheat	mitochondrion	95.65	95.65
TraesCS4A01G084900.2	Wheat	mitochondrion	90.22	91.71
HORVU4Hr1G062250.1	Barley	mitochondrion	91.3	91.3
EER92528	Sorghum	mitochondrion	63.04	62.37
Zm00001d034058_P004	Maize	mitochondrion	63.59	61.58
Os03t0257500-01	Rice	mitochondrion	63.04	60.1
Zm00001d028457_P001	Maize	mitochondrion	63.04	58.0
OQU90964	Sorghum	mitochondrion	47.83	52.69
Zm00001d034057_P001	Maize	mitochondrion	63.04	50.66
TraesCS4B01G219400.1	Wheat	mitochondrion	67.93	47.35
Zm00001d047887_P001	Maize	mitochondrion	59.78	44.18
Zm00001d047886_P001	Maize	mitochondrion	59.24	43.6
Zm00001d047885_P001	Maize	mitochondrion	58.7	43.2
VIT_14s0006g03050.t01	Wine grape	mitochondrion	34.78	41.03
Zm00001d047884_P001	Maize	cytosol	24.46	31.47
Solyc02g085830.2.1	Tomato	mitochondrion	35.33	31.25
PGSC0003DMT400032944	Potato	mitochondrion	34.24	30.29
TraesCS4B01G045100.1	Wheat	mitochondrion	44.57	23.23
TraesCS4B01G044800.1	Wheat	mitochondrion	41.85	22.92
TraesCS3B01G296700.1	Wheat	mitochondrion, plastid	35.33	20.38
GSMUA_Achr6P07700_001	Banana	cytosol, mitochondrion, nucleus	45.65	19.72
KRH46919	Soybean	mitochondrion	42.93	19.27
CDY50176	Canola	mitochondrion	40.76	19.04
TraesCS4B01G219200.1	Wheat	mitochondrion, plastid	55.98	19.0
PGSC0003DMT400033769	Potato	mitochondrion	43.48	18.74
Solyc05g009550.2.1	Tomato	mitochondrion	43.48	18.74
CDY21093	Canola	mitochondrion	40.22	18.73
CDY19375	Canola	mitochondrion	41.3	18.63
KRH75395	Soybean	mitochondrion	40.22	18.36
AT1G13340.1	Thale cress	mitochondrion	40.76	18.34
GSMUA_Achr6P24100_001	Banana	mitochondrion	48.37	18.2
KRH45249	Soybean	mitochondrion	38.59	17.93
KRH01764	Soybean	mitochondrion	42.93	17.87
GSMUA_Achr10P...	Banana	mitochondrion	45.65	17.36
VIT_01s0011g03330.t01	Wine grape	mitochondrion	40.76	16.03
Bra019826.1-P	Field mustard	mitochondrion	41.3	15.38
TraesCS5B01G347800.1	Wheat	mitochondrion	35.87	13.64
TraesCS3B01G498800.1	Wheat	cytosol	33.15	11.94
Bra016733.1-P	Field mustard	mitochondrion	40.22	9.91
TraesCS6B01G161300.1	Wheat	cytosol, nucleus, plastid	29.35	7.57
TraesCS7B01G345200.1	Wheat	cytosol, nucleus, plastid	26.63	6.74
TraesCS3B01G284600.1	Wheat	nucleus	30.43	5.04
TraesCS3B01G288900.2	Wheat	plastid	30.43	4.86

Protein Annotations

EnsemblPlants:TraesCS4B01G219300.1	EnsemblPlantsGene:TraesCS4B01G219300	Gene3D:1.20.1260.60	GO:GO:0006810	GO:GO:0008150	GO:GO:0015031
InterPro:Ist1	PANTHER:PTHR12161	PANTHER:PTHR12161:SF26	PFAM:PF03398	MapMan:35.2	:

Description

No Description!

Coordinates

chr4B:+:462204604..462205481

Molecular Weight (calculated)

20258.9 Da

IEP (calculated)

9.576

GRAVY (calculated)

-0.129

Length

184 amino acids

Sequence
(BLAST)

001: MGFLRKFSKQ TRKLKSLLEL TVSRVAIARK PRLARKSIAS GDVCQLLSLG QTDRALQRVE QVIKEDNMLE ALGIIELYCK CLVKKADQLD KPKECSEEVK
101: EAVAGLVFAA KRCSDLPELQ SARNILVDKF GDDITADAKV GTAVVEPMLV WKLSGDTTSI SLKKKVLKEI AAENNISVDL SKSP

Best Arabidopsis Sequence Match ( AT1G13340.1 )
(BLAST)

001: MGKKLDALLG RSFKTNKFKS LITLALTRLS ILKNQRQARL SQAISDVTEL LKLGQHEHAY HRVDQVVKDQ NTLDVLFFIH GYFTLCLDRI HLFEHNRDCP
101: EELLEAVSGL LFAASRIGEF PELQEIRNVL ISRFGKDLAA RSIELRSNCG VDPKIIQKLS TRPPPKEVRM KALKEIAAEN NIVLKLDQAS TSTEGTTNMQ
201: GTSDVSKTKL TSKDGRGEGY GLSDSVKRGK KKYKDVADAA QAAFESAAHA AEAAQAAVEL SQFSPRGHDS PGNIGGENSF HGSENKESEQ EQEGNDDSSE
301: GEGDVMSESK RSMSDSEDII DVPVMSFRED PVKLLEKDTI IYDSEEETQP SVETITISKS KDEQNRMVGS NRADTRHVDH MVRSIEDPIM RKAGLKGPVS
401: VRTRQVRGY

Arabidopsis Description

Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:Q9FX63]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.